The spike-specific TCRβ repertoire shows distinct features in unvaccinated or vaccinated patients with SARS-CoV-2 infection

Table 2 Information on immune repertoire sequencing and analysis

Patient ID	n_sequence pre-stimul	n_cln^a pre-stimul	n_sequence post-stimul	n_cln post-stimul	cln in MIRA^b	Spike_seq% (pre)^c	Spike_seq% (post) ^c
NV1	247282	6409	383272	7742	354	0.0569	0.3942
NV2	273882	5729	323193	5818	151	0.0157	0.1695
NV3	261658	819	265033	782	18	0.0021	0.0141
NV4	257575	13102	301684	14964	366	0.0167	0.1625
NV5	219148	1043	220453	971	16	0.0002	0.0066
NV6	251356	3034	257134	2954	100	0.0027	0.0250
V1	224835	9705	262842	9398	234	0.0190	0.1607
V2	254176	15466	278062	17213	262	0.0097	0.0954
V3	308290	1327	417838	1302	49	0.0258	0.2913
V4	294426	5136	349308	5136	238	0.0105	0.1746
V5	259694	7373	274769	8288	176	0.0072	0.0610
V6	257651	1197	270071	1196	34	0.0070	0.0511
V7	259800	938	262788	900	32	0.0012	0.0126
V8	229324	1054	233338	1048	17	0.0025	0.0191

ISSN: 1479-5876