Fig. 6

The combined analysis of proteome and transcriptome. A The Venn diagram of proteomic and transcriptomic result. All_Protein represents all the quantifiable proteins of the proteome; All_mRNA represents all the quantifiable genes obtained from the transcriptome; DE_Protein represents the differentially expressed proteins; DE_mRNA represents the differentially expressed genes. B Overall analysis of correlation between proteome and transcriptome. NDEPs means no differentially expressed protein; NDEGs means no differentially expressed gene (mRNA); DEPs means differentially expressed proteins; DEGs means differentially expressed genes (mRNA). C Correlation diagram of differentially expressed proteins and differentially expressed genes (mRNA). Red dots (DEPs_DEGs) represent differentially expressed proteins and genes. D A heatmap for clustering analysis of differentially expressed proteins and genes (mRNA). E GO enrichment of combined analysis between proteomics and transcriptomics results. Red column represents proteome; cyan column represents transcriptome