Table 5 SNP annotation of intestinal flora IVs
| Â | Â | id | chr | Start | End | Strand | Gene_ids | Gene_names |
|---|---|---|---|---|---|---|---|---|
Family | Porphyromonadaceae | rs10119172 |  | − 1 | − 1 |  | ENSG00000264615 | RN7SL592P |
|  |  | rs1029811 |  | − 1 | − 1 |  | – | – |
|  |  | rs10762312 | 10 | 69,812,107 | 69,812,107 | + | ENSG00000197467 ENSG00000289193 | COL13A1 – |
|  |  | rs10858364 |  | − 1 | − 1 |  | – | – |
| Â | Â | rs12700163 | 7 | 2,609,042 | 2,609,042 | + | ENSG00000106012 | IQCE |
| Â | Â | rs17065783 | 3 | 62,049,912 | 62,049,912 | + | ENSG00000144724 | PTPRG |
| Â | Â | rs2066088 | 1 | 1.65E+08 | 1.65E+08 | + | ENSG00000185630 | PBX1 |
|  |  | rs2401072 |  | − 1 | − 1 |  | – | – |
| Â | Â | rs35233670 | 17 | 65,754,785 | 65,754,785 | + | ENSG00000154240 | CEP112 |
|  |  | rs35961441 | 1 | 2.41E+08 | 2.41E+08 | + | ENSG00000226919 ENSG00000182901 | – RGS7 |
|  |  | rs7330827 |  | − 1 | − 1 |  | – | – |
Genus | Slackia | rs1006200 |  | − 1 | − 1 |  | – | – |
| Â | Â | rs10409783 | 19 | 4,555,774 | 4,555,774 | + | ENSG00000167680 | SEMA6B |
|  |  | rs11957560 | 5 | 31,268,861 | 31,268,861 | + | ENSG00000113361 ENSG00000254138 | CDH6 – |
| Â | Â | rs12440440 | 15 | 33,749,695 | 33,749,695 | + | ENSG00000198838 | RYR3 |
|  |  | rs16894137 |  | − 1 | − 1 |  | – | – |
| Â | Â | rs35156985 | 7 | 99,854,092 | 99,854,092 | + | ENSG00000021461 | CYP3A43 |
|  |  | rs4492265 | 7 | 13,484,058 | 13,484,058 | + | ENSG00000229618 | – |
|  |  | rs7710333 | 5 | 1.78E+08 | 1.78E+08 | + | ENSG00000246596 ENSG00000290968 | – – |
| Â | Â | rs8901 | 17 | 76,270,929 | 76,270,929 | + | ENSG00000185262 | UBALD2 |
|  | Anaerotruncus | rs10150232 | 14 | 29,948,802 | 29,948,802 | + | ENSG00000184304, ENSG00000257904 | PRKD1 – |
|  |  | rs11018566 |  | − 1 | − 1 |  | – | – |
|  |  | rs12056802 | 8 | 73,800,865 | 73,800,865 | + | ENSG00000104343 ENSG00000258677 | UBE2W – |
| Â | Â | rs1272208 | 9 | 76,015,978 | 76,015,978 | + | ENSG00000099139 | PCSK5 |
| Â | Â | rs1431492 | 3 | 1.51E+08 | 1.51E+08 | + | ENSG00000144893 | MED12L |
| Â | Â | rs4669806 | 2 | 12,060,626 | 12,060,626 | + | ENSG00000224184 | MIR3681HG |
| Â | Â | rs6563550 | 13 | 37,484,276 | 37,484,276 | + | ENSG00000230390 | LINC01048 |
| Â | Â | rs7675045 | 4 | 1.72E+08 | 1.72E+08 | + | ENSG00000174473 | GALNTL6 |
| Â | Â | rs7963258 | 12 | 1.13E+08 | 1.13E+08 | + | ENSG00000089169 | RPH3A |
|  |  | rs9347879 |  | − 1 | − 1 |  | – | – |
|  | Intestinibacter | rs10805326 |  | − 1 | − 1 |  | – | – |
| Â | Â | rs11109097 | 12 | 97,534,659 | 97,534,659 | + | ENSG00000255794 | RMST |
|  |  | rs112879476 |  | − 1 | − 1 |  | – | – |
| Â | Â | rs16938435 | 9 | 21,502,924 | 21,502,924 | + | ENSG00000171889 | MIR31HG |
|  |  | rs2098844 |  | − 1 | − 1 |  | – | – |
|  |  | rs2702387 |  | − 1 | − 1 |  | – | – |
| Â | Â | rs4327025 | 15 | 91,903,453 | 91,903,453 | + | ENSG00000176463 | SLCO3A1 |
|  |  | rs447950 |  | − 1 | − 1 |  | – | – |
| Â | Â | rs6875660 | 5 | 1.6E+08 | 1.6E+08 | + | ENSG00000135083 | CCNJL |
|  |  | rs9348442 |  | − 1 | − 1 |  | – | – |