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Table 4 Comparison results on Dataset Fine-tuning Variants

From: Precision information extraction for rare disease epidemiology at scale

Dataset

Entity-level F1

Standard Dataset (with 8 entity classes)

0.755

Dataset with ABRV and DIS merged (with 7 entity classes)

0.750

Dataset without ABRV and DIS (with 6 entity classes)

0.836

Dataset without ABRV, DIS, ETHN (with 5 entity classes)

0.819