Table 2 Predicted TuAs from cancer-specific proteins and their presence in the HLA Ligand Atlas of normal tissues
From: Antigenic molecular mimicry in viral-mediated protection from cancer: the HIV case
MHC | Peptide | Aff (nM) | HLA Ligand Atlas |
|---|---|---|---|
Breast: CCR9 | |||
HLA-A*02:01 | AIADLLFLV | 3,76 | No match |
HLA-A*02:01 | FLPPLYWLV | 2,67 | No match |
HLA-A*02:01 | ILGFFLPFV | 5,12 | No match |
HLA-A*03:01 | KSSKHKALK | 73,36 | No match |
HLA-A*24:02 | LYVFVGERF | 22,26 | No match |
HLA-A*24:02 | CYTIIIHTL | 40,22 | No match |
HLA-A*24:02 | RYIAIAQAM | 70,57 | No match |
HLA-A*26:01 | QTIDAYAMF | 19,7 | No match |
HLA-B*07:02 | TPTDFTSPI | 68,5 | No match |
HLA-B*08:01 | STKLKSAVL | 48,06 | No match |
HLA-B*39:01 | FHSCLNPVL | 5,92 | No match |
HLA-B*39:01 | SQFPYNCIL | 45,12 | No match |
HLA-B*40:01 | MEDYVNFNF | 46,12 | No match |
HLA-B*58:01 | IAAADQWKF | 13,32 | No match |
HLA-B*58:01 | NSLVILVYW | 28,08 | No match |
HLA-B*58:01 | VTITVLTVF | 48,71 | No match |
HLA-B*58:01 | LTLKVILGF | 31,09 | No match |
HLA-B*58:01 | WAIAAADQW | 7,46 | No match |
HLA-B*58:01 | LGCISQAQW | 22,22 | No match |
HLA-B*58:01 | KTMTDMFLL | 10,03 | No match |
HLA-B*58:01 | SSMEDYVNF | 96,02 | No match |
HLA-B*58:01 | LTVFVLSQF | 92,21 | No match |
HLA-B*15:01 | FQVTQTIAF | 11,07 | No match |
HLA-B*15:01 | LLVQTIDAY | 23,98 | No match |
HLA-B*15:01 | LLYSKMVCF | 42,55 | No match |
HLA-B*15:01 | RVKTMTDMF | 94,33 | No match |
HLA-B*15:01 | VTITVLTVF | 39,98 | No match |
Brain: DPYSL2 | |||
HLA-A*02:01 | KMDENQFVA | 37,21 | Ovary |
HLA-A*02:01 | VLEDGTLHV | 56,91 | No match |
HLA-A*02:01 | ALAGGTTMI | 98,73 | No match |
HLA-A*03:01 | KVFNLYPRK | 11,63 | No match |
HLA-A*03:01 | ITSDRLLIK | 83,95 | No match |
HLA-A*24:02 | VYMAFKDRF | 8,25 | Liver, Lung |
HLA-A*26:01 | HVTEGSGRY | 64,02 | No match |
HLA-B*07:02 | YPRKGRIAV | 2,87 | Liver, Lung |
HLA-B*07:02 | IPRRTTQRI | 19,79 | No match |
HLA-B*07:02 | IPRITSDRL | 26,75 | No match |
HLA-B*07:02 | IPRKPFPDF | 27,37 | No match |
HLA-B*07:02 | KARSRLAEL | 37,6 | No match |
HLA-B*07:02 | SAKTHNSSL | 74,97 | No match |
HLA-B*07:02 | VPEPGTSLL | 88,37 | No match |
HLA-B*08:01 | SAKTHNSSL | 40,66 | No match |
HLA-B*08:01 | YPRKGRIAV | 54,2 | No match |
HLA-B*15:01 | FQLTDCQIY | 53,36 | No match |
HLA-B*15:01 | KTHNSSLEY | 78,35 | Tongue |
HLA-B*27:05 | KRIKARSRL | 70,69 | No match |
HLA-B*27:05 | ARSRLAELR | 76,74 | No match |
HLA-B*27:05 | SRMVIPGGI | 76,85 | No match |
HLA-B*40:01 | LEYNIFEGM | 42,86 | Multiple Tissues |
HLA-B*40:01 | IEAHSRMVI | 86,33 | No match |
HLA-B*40:01 | MEDGLIKQI | 95,51 | Multiple Tissues |
HLA-B*58:01 | AAFDQWREW | 26,57 | No match |
HLA-B*58:01 | LGTDGSHYW | 27,85 | No match |
HLA-B*58:01 | GSDADLVIW | 38,13 | No match |
HLA-B*58:01 | SLLAAFDQW | 53,69 | No match |
Brain: SPARC | |||
HLA-A*02:01 | WLKNVLVTL | 38,11 | No match |
HLA-A*24:02 | YIFPVHWQF | 79,77 | Multiple tissues |
HLA-B*08:01 | WLKNVLVTL | 91,35 | No match |
HLA-B*15:01 | KTFDSSCHF | 29,21 | No match |
HLA-B*27:05 | MRAWIFFLL | 9,57 | No match |
HLA-B*39:01 | MRDWLKNVL | 8,7 | No match |
HLA-B*39:01 | MRAWIFFLL | 15,81 | No match |
HLA-B*58:01 | KTFDSSCHF | 14,61 | No match |
Colon: CDH17BIS | |||
HLA-A*01:01 | VIEREGLLY | 70,39 | No match |
HLA-A*01:01 | FTGSSKILY | 43,81 | No match |
HLA-A*01:01 | NTANSFLNY | 46,99 | No match |
HLA-A*02:01 | ILQAHLHSL | 12,25 | No match |
HLA-A*02:01 | KLPRFPFSI | 14,74 | No match |
HLA-A*02:01 | IQLPMINNV | 54,97 | No match |
HLA-A*02:01 | LVIGIILAV | 32,48 | No match |
HLA-A*02:01 | GLFLIQTYA | 43,93 | No match |
HLA-A*03:01 | VMYFQINNK | 10,12 | No match |
HLA-A*03:01 | QLAKQSLKK | 72,8 | No match |
HLA-A*03:01 | AVVFIRIKK | 79,68 | No match |
HLA-A*24:02 | LFRGPHFTF | 71,32 | No match |
HLA-A*26:01 | NTANSFLNY | 56,93 | No match |
HLA-B*07:02 | HPLSAPGSL | 11,9 | No match |
HLA-B*07:02 | RPAGHQTGI | 13,94 | No match |
HLA-B*07:02 | APQFSQHVF | 55,95 | No match |
HLA-B*07:02 | RPGKPFLYV | 59,59 | No match |
HLA-B*08:01 | ILQAHLHSL | 37,38 | No match |
HLA-B*08:01 | MLQLAKQSL | 92,53 | No match |
HLA-B*39:01 | THNLQVAAL | 16,43 | No match |
HLA-B*39:01 | FKAENPEPL | 13,19 | No match |
HLA-B*40:01 | RETRSTHNL | 35,21 | No match |
HLA-B*40:01 | FEVQENERL | 42,52 | No match |
HLA-B*40:01 | GETDNIFVI | 12,73 | No match |
HLA-B*40:01 | FEEREYVVL | 18,94 | No match |
HLA-B*40:01 | GEIFSVAPL | 5,02 | No match |
HLA-B*40:01 | FETAAVSNI | 52,35 | No match |
HLA-B*40:01 | QEGKFSGPL | 41,12 | No match |
HLA-B*58:01 | KANPPAVTF | 17,57 | No match |
HLA-B*58:01 | LSAPGSLIF | 12,51 | No match |
HLA-B*58:01 | GSGSLQNDW | 83,99 | No match |
HLA-B*58:01 | SSLSSVSEF | 88,68 | No match |
HLA-B*15:01 | RLSTRHTEF | 44,77 | No match |
HLA-B*15:01 | GVKYNASSF | 67,45 | No match |
HLA-B*15:01 | LSAPGSLIF | 34,98 | No match |
Colon: GLOD 5 MHC | |||
HLA-A*02:01 | RLDHIVMTV | 5,77 | No match |
HLA-A*02:01 | NLIEVSNYI | 10,19 | No match |
HLA-A*03:01 | KMWGRTLEK | 3,88 | No match |
HLA-A*03:01 | IVMTVKSIK | 55,26 | No match |
HLA-B*08:01 | MLRHLPSRL | 90,51 | No match |
HLA-B*58:01 | KSIKDTTMF | 9,83 | No match |
HLA-B*15:01 | SIKDTTMFY | 60,19 | No match |
Colon: PPM1E | |||
HLA-A*01:01 | CSAPADLGY | 31,65 | No match |
HLA-A*02:01 | SVFSKLHEI | 36,35 | No match |
HLA-A*02:01 | FLAAALARA | 5,94 | No match |
HLA-A*02:01 | YLDLTQIEA | 57,91 | No match |
HLA-A*02:01 | SLSPVCSGL | 61,33 | No match |
HLA-A*03:01 | KLARSVFSK | 9,37 | No match |
HLA-A*03:01 | AIYASIHLH | 98,98 | No match |
HLA-A*03:01 | LINELMMEK | 59,44 | No match |
HLA-A*03:01 | VVFLRDMNK | 32,23 | No match |
HLA-A*03:01 | HLRHHYSKK | 46,87 | No match |
HLA-A*03:01 | RIRSSLPWR | 53,88 | No match |
HLA-A*24:02 | RFNPKFYSF | 11,44 | No match |
HLA-A*24:02 | HYSKKWHRF | 20 | No match |
HLA-A*24:02 | TYRRFLELF | 14,81 | No match |
HLA-A*24:02 | IYASIHLHV | 38,63 | No match |
HLA-A*24:02 | YYETSIHAI | 83,38 | No match |
HLA-A*24:02 | LYKYNCPSF | 35,21 | No match |
HLA-B*07:02 | FPLRRRPQL | 9,87 | No match |
HLA-B*07:02 | FPHDPAEAL | 63,53 | No match |
HLA-B*07:02 | SPGNRVSRL | 35,08 | No match |
HLA-B*07:02 | SPGSQINVL | 51,81 | No match |
HLA-B*07:02 | KPHSAQFLL | 47,07 | No match |
HLA-B*07:02 | LPRPLSERI | 66,63 | No match |
HLA-B*07:02 | CPSFLAAAL | 22,27 | No match |
HLA-B*08:01 | FPLRRRPQL | 9,91 | No match |
HLA-B*08:01 | MLVRKGQAV | 26,5 | No match |
HLA-B*08:01 | KTYRRFLEL | 92,81 | No match |
HLA-B*15:01 | LQSDLSAHY | 11,02 | No match |
HLA-B*15:01 | ASKPHSAQF | 74,89 | No match |
HLA-B*15:01 | AQFLLPVEM | 90,51 | No match |
HLA-B*15:01 | RLSHLRHHY | 67,82 | No match |
HLA-B*27:05 | HRFRFNPKF | 21,58 | No match |
HLA-B*27:05 | KRNRIRSSL | 47,8 | No match |
HLA-B*27:05 | YRRFLELFL | 52,81 | No match |
HLA-B*39:01 | WRVNGSLSV | 42,89 | No match |
HLA-B*39:01 | YRMQSLSPV | 16,71 | No match |
HLA-B*40:01 | GEFPTAFNL | 8,41 | No match |
HLA-B*40:01 | REEVEGESL | 22,28 | No match |
HLA-B*40:01 | LEDPGYLDL | 59,85 | No match |
HLA-B*40:01 | QEEQAYFAV | 54,53 | No match |
HLA-B*58:01 | SVQSSLPEW | 44,83 | No match |
HLA-B*58:01 | RGNMLHVAW | 34,54 | No match |
Colon: TRIM16 | |||
HLA-A*02:01 | YLHRYYFEV | 2,33 | No match |
HLA-A*02:01 | VLSQQSLYL | 58,02 | No match |
HLA-A*02:01 | RMAAISNTV | 13,5 | No match |
HLA-A*03:01 | GTYVGLTCK | 29,93 | No match |
HLA-A*03:01 | SVYVGLKDK | 83,52 | No match |
HLA-A*24:02 | RYYFEVEIF | 10,7 | No match |
HLA-A*26:01 | DTMTLVHKF | 63,32 | No match |
HLA-A*26:01 | NTVQFLEEY | 32,67 | No match |
HLA-B*08:01 | SLYLHRYYF | 95,86 | No match |
HLA-B*15:01 | LQYAYDITF | 8,56 | No match |
HLA-B*15:01 | HLIQLLENY | 64,75 | No match |
HLA-B*15:01 | RQVLSQQSL | 84,65 | No match |
HLA-B*15:01 | ILSFYGVEY | 57,78 | No match |
HLA-B*15:01 | SLYLHRYYF | 75,83 | No match |
HLA-B*27:05 | RRLGVYIDF | 56,62 | No match |
HLA-B*27:05 | SRFLHWRQV | 54,5 | No match |
HLA-B*40:01 | AEMQFGELL | 4,59 | Thymus |
HLA-B*40:01 | SEVKAVAEM | 28,88 | No match |
HLA-B*40:01 | LEEKEQAAL | 40,08 | No match |
HLA-B*40:01 | QEHSGHTIV | 61,14 | No match |
HLA-B*40:01 | QELERMAAI | 97,6 | No match |
HLA-B*58:01 | KAQANVMLF | 13,36 | No match |
HLA-B*58:01 | CISGNNFSW | 31,21 | No match |
Colon: CEACAM8 | |||
HLA-A*01:01 | FSDPVTLNV | 44,46 | Bone marrow |
HLA-A*02:01 | IMIGVLARV | 5,67 | No match |
HLA-A*02:01 | FSDPVTLNV | 65,43 | No match |
HLA-A*02:01 | KLNLMSEEV | 39,39 | No match |
HLA-A*03:01 | GTFQQYTQK | 35,5 | Bone marrow |
HLA-A*03:01 | GSYTLQVIK | 70,59 | No match |
HLA-A*24:02 | LYGPDAPTI | 83,9 | No match |
HLA-A*24:02 | IYPNASLLM | 53,31 | No match |
HLA-A*26:01 | ETIYPNASL | 71,49 | No match |
HLA-B*07:02 | LPVSPRLQL | 9,45 | No match |
HLA-B*15:01 | QQITPGPAY | 19,97 | Bone marrow |
HLA-B*15:01 | IQNPASANF | 9,34 | Bone marrow |
HLA-B*15:01 | SVNGTFQQY | 83,79 | Bone marrow |
HLA-B*15:01 | FQQYTQKLF | 52,48 | No match |
HLA-B*15:01 | VTRNDTGSY | 94,41 | No match |
HLA-B*27:05 | WRIPWQGLL | 18,87 | No match |
HLA-B*39:01 | YHAGVNLNL | 9,24 | No match |
HLA-B*39:01 | WRIPWQGLL | 91,33 | No match |
HLA-B*40:01 | AEGKEVLLL | 78,97 | No match |
HLA-B*58:01 | LTASLFTFW | 3,13 | No match |
HLA-B*58:01 | ETQNTTYLW | 36,36 | No match |
HLA-B*58:01 | YSWSVNGTF | 20,84 | No match |
Colon: EPCAM | |||
HLA-A*02:01 | GLKAGVIAV | 69,41 | No match |
HLA-A*02:01 | VVAGIVVLV | 48,75 | No match |
HLA-A*03:01 | KSLRTALQK | 50,33 | No match |
HLA-A*26:01 | DIADVAYYF | 90,16 | No match |
HLA-B*40:01 | KEITTRYQL | 25,58 | No match |
HLA-B*40:01 | AEIKEMGEM | 66,18 | No match |
HLA-B*58:01 | CSERVRTYW | 23,26 | No match |
HLA-B*15:01 | LQKEITTRY | 14,52 | No match |
HLA-B*15:01 | LLAAATATF | 4,39 | No match |
Prostate: NDUFS2 | |||
HLA-A*01:01 | VTAEEALNY | 58,86 | No match |
HLA-A*01:01 | VSDGSSRPY | 72,62 | No match |
HLA-A*02:01 | RLLNHIMAV | 2,59 | No match |
HLA-A*02:01 | KMFEFYERV | 3,05 | No match |
HLA-A*02:01 | KLIEYKTYL | 4,96 | No match |
HLA-A*02:01 | MLADVVAII | 5,94 | No match |
HLA-A*02:01 | KLYTEGYQV | 6,73 | No match |
HLA-A*02:01 | YQFSKNFSL | 7,18 | Multiple tissues |
HLA-A*02:01 | HMLADVVAI | 16,16 | No match |
HLA-A*02:01 | VLFGEITRL | 19,13 | No match |
HLA-A*02:01 | ALNYGFSGV | 23,23 | No match |
HLA-A*02:01 | IMAVTTHAL | 27,34 | No match |
HLA-A*02:01 | RLDELEELL | 29,47 | No match |
HLA-A*02:01 | GLMDDIYQF | 49,65 | No match |
HLA-A*02:01 | KMPPGEIKV | 84,76 | No match |
HLA-A*03:01 | KTYLQALPY | 18,63 | No match |
HLA-A*03:01 | RIIAQCLNK | 25,84 | No match |
HLA-A*03:01 | GLLHRGTEK | 52,91 | No match |
HLA-A*24:02 | TYLQALPYF | 10,57 | No match |
HLA-A*24:02 | AMTPFFWLF | 20,73 | No match |
HLA-A*24:02 | RYLCRVEEM | 59,38 | No match |
HLA-B*07:02 | RPGGVHQDL | 21,45 | No match |
HLA-B*07:02 | RVEEMRQSL | 90,96 | No match |
HLA-B*15:01 | YQVPPGATY | 9,56 | No match |
HLA-B*15:01 | AQQFGGAVM | 15,81 | No match |
HLA-B*15:01 | SMMCNEQAY | 16,28 | No match |
HLA-B*15:01 | QQFGGAVMY | 23,49 | No match |
HLA-B*15:01 | KTYLQALPY | 41,5 | No match |
HLA-B*15:01 | YQFSKNFSL | 56,91 | No match |
HLA-B*15:01 | IVKNITLNF | 58,22 | No match |
HLA-B*15:01 | SLIHHFKLY | 68,72 | No match |
HLA-B*27:05 | ARMHAAYIR | 37,13 | No match |
HLA-B*39:01 | YQFSKNFSL | 5,33 | No match |
HLA-B*39:01 | FRGVAAQVL | 45,59 | No match |
HLA-B*39:01 | THALDLGAM | 81,98 | No match |
HLA-B*40:01 | AEEALNYGF | 88,35 | No match |
HLA-B*58:01 | LGAMTPFFW | 6,09 | No match |
HLA-B*58:01 | RAQWIRVLF | 56,87 | No match |
Lung: CNIH4 | |||
HLA-A*02:01 | LLMSLHWFI | 3,25 | No match |
HLA-A*02:01 | YLYSMILAL | 3,82 | No match |
HLA-A*02:01 | SLHWFIFLL | 10,12 | No match |
HLA-A*02:01 | FLLNLPVAT | 15,76 | No match |
HLA-A*02:01 | AMIKLGFHL | 21,24 | No match |
HLA-A*02:01 | LIGHTIVTV | 69,56 | No match |
HLA-A*24:02 | LYSMILALI | 32,32 | No match |
HLA-B*07:02 | VPSGNMGVF | 77,38 | No match |
HLA-B*08:01 | MIKLGFHLL | 25,27 | No match |
HLA-B*58:01 | LLNLPVATW | 99,66 | No match |
Lung: PRPF40A | |||
HLA-A*02:01 | YLMDNPTFA | 4,03 | No match |
HLA-A*02:01 | ALDLFKFYV | 8,07 | No match |
HLA-A*02:01 | MMMSHMSQA | 9,12 | No match |
HLA-A*02:01 | RIFKDFMHV | 15,96 | No match |
HLA-A*02:01 | NILDNMANV | 34,74 | No match |
HLA-A*02:01 | TLDAGNIKL | 84,81 | Ovary |
HLA-A*03:01 | KMTSTTRYK | 11,36 | No match |
HLA-A*03:01 | KSNLHAMIK | 29,28 | No match |
HLA-A*03:01 | IVAGSLITK | 36,6 | Multiple tissues |
HLA-A*03:01 | KQAFKELLK | 63,33 | No match |
HLA-A*03:01 | LAFNSLLEK | 65,36 | No match |
HLA-A*03:01 | TVADFTPKK | 91,15 | No match |
HLA-A*03:01 | MTSTTRYKK | 98,8 | No match |
HLA-A*24:02 | SWMELYPTI | 12,79 | No match |
HLA-A*24:02 | QYLMDNPTF | 54,19 | No match |
HLA-A*24:02 | RYKKAEQMF | 69,86 | No match |
HLA-A*26:01 | EIPTTMSTM | 42,38 | No match |
HLA-A*26:01 | EIYEDVLFF | 48,08 | No match |
HLA-A*26:01 | FVVEVNTTF | 90,52 | Multiple tissues |
HLA-B*07:02 | HPMGQRANM | 5,68 | No match |
HLA-B*07:02 | RPSMGHPGM | 6,99 | No match |
HLA-B*07:02 | HPGMHYAPM | 8,62 | No match |
HLA-B*07:02 | MPGMMSSVM | 11,35 | No match |
HLA-B*07:02 | MPPMGGPPM | 28,69 | Spleen |
HLA-B*07:02 | MPPVPHGMM | 60,4 | No match |
HLA-B*07:02 | VPHGMMPQM | 70,06 | No match |
HLA-B*08:01 | NIKLAFNSL | 30,71 | No match |
HLA-B*08:01 | ELEKRRRTL | 57,75 | No match |
HLA-B*15:01 | RQRKNRESF | 38,7 | No match |
HLA-B*15:01 | FVVEVNTTF | 39,02 | No match |
HLA-B*15:01 | KMKRKESAF | 42,12 | No match |
HLA-B*15:01 | SMGHPGMHY | 45,42 | No match |
HLA-B*15:01 | SMSSWMELY | 55,07 | No match |
HLA-B*15:01 | SQASMQPAL | 93,92 | No match |
HLA-B*27:05 | RRRTLLEQL | 35,63 | No match |
HLA-B*27:05 | SRWAKPKEL | 70,18 | No match |
HLA-B*39:01 | SQASMQPAL | 33,18 | No match |
HLA-B*39:01 | NRESFQIFL | 87,31 | No match |
HLA-B*40:01 | GEMEVWNAI | 5,84 | No match |
HLA-B*40:01 | KESAFKSML | 27,62 | No match |
HLA-B*58:01 | GSSLCSGSW | 22,83 | No match |
HLA-B*58:01 | QMFGEMEVW | 23,31 | No match |
HLA-B*58:01 | KTGKDSGNW | 25,86 | No match |
HLA-B*58:01 | TASGAKSMW | 39,94 | No match |
HLA-B*58:01 | STALDLFKF | 58,82 | No match |