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Table 2 Preliminary results of different feature descriptors using different classifiers

From: iTTCA-RF: a random forest predictor for tumor T cell antigens

Features

Classifier (BACC%)

LR

Bagging

RF

AB

GBM

SVM

GPSD

63.09

68.51

69.62

67.51

65.60

65.81

ASDC

58.53

63.13

66.88

62.96

64.03

64.51

GAAPC

58.91

66.75

67.71

64.44

67.56

61.75

PAAC

66.01

61.79

62.45

62.68

62.34

67.91

GPSD_Ba

67.12

75.23

79.62

73.54

76.91

76.13

ASDC_Ba

69.50

72.77

79.19

71.90

77.02

77.89

GAAPC_Ba

66.33

75.51

79.14

73.02

78.34

74.94

PAAC_Ba

66.63

71.77

77.46

69.91

74.29

73.09

  1. The best performance value is highlighted in bold for clarification
  2. aSMOTE-Tomek technique was applied to balance the data set