From: MiR-199a-3p/5p participated in TGF-β and EGF induced EMT by targeting DUSP5/MAP3K11 in pterygium
Primer name | Forward primer (5′ → 3′) | Reverse primer (5′ → 3′) | Amplicon length (bp) | Tm (°C) |
---|---|---|---|---|
U6 | CTCGCTTCGGCAGCACA | AACGCTTCACGAATTTGCGT | 94 | 60 |
U6-RT | AACGCTTCACGAATTTGCGT | |||
miR-30a-5p | GCGCTGTAAACATCCTCGAC | GTGCAGGGTCCGAGGTATTC | 60 | 60 |
miR-30a-5p-RT | GTCGTATCCAGTGCAGGGTCCGAGGTATTCGCACTGGATACGACCTTCCAGT | |||
miR-199-5p | GCCCAGTGTTCAGACTACCTG | GTGCAGGGTCCGAGGTATTC | 58 | 60 |
miR-199-5p-RT | GTCGTATCCAGTGCAGGGTCCGAGGTATTCGCACTGGATACGACGAACAGGT | |||
miR-143-5p | GGTGCAGTGCTGCATCTCT | GTGCAGGGTCCGAGGTATTC | 56 | 60 |
miR-143-5p-RT | GTCGTATCCAGTGCAGGGTCCGAGGTATTCGCACTGGATACGACACCA GAGA | |||
miR-486-3p | CGGGGCAGCTCAGTACAG | GTGCAGGGTCCGAGGTATTC | 65 | 60 |
miR-486-3p-RT | GTCGTATCCAGTGCAGGGTCCGAGGTATTCGCACTGGATACGACATCCTGTA | |||
miR-199-3p | GCACAGTAGTCTGCACATTGG | GTGCAGGGTCCGAGGTATTC | 68 | 60 |
miR-199-3p-RT | GTCGTATCCAGTGCAGGGTCCGAGGTATTCGCACTGGATACGACTAACCAAT | |||
miR-675-5p | TATATGGTGCGGAGAGGGC | GTGCAGGGTCCGAGGTATTC | 71 | 60 |
miR-675-5p-RT | GTCGTATCCAGTGCAGGGTCCGAGGTATTCGCACTGGATACGACCACTGTGG | |||
DUSP5 mRNA | CTACTCGCTTGCCTACCC | ACATCCACGCAACACTCA | 95 | 57 |
DUSP5 3′UTR | ATACTCGAGAACTGGGATGGAGGAATC | TGGGTCGACTGCTTTTCTCCTTTTACTATTTTTA | 1118 | 53 |
MAP3K11 mRNA | GTGCCATACCGTGGCATTGA | CATTTCCCGTAGGACCTGTG | 204 | 60 |
MAP3K11 3′UTR | GCTCGCTAGCCTCGAGGTGGGCCAGGCCACTCCC | ATGCCTGCAGGTCGACTGTGGGGAGACAGCTTTTGAG | 536 | 67 |
CDH1 (E-cadherin) | GGATTGTCGGATTGGGAGAA | CATTCTGCTGCTTGAGGGTT | 194 | 60 |
CDH2 (N-cadherin) | GAGTCGAACAGCAGCTCTGA | CTTGTCTGCTTCGGTTTGAC | 199 | 60 |
VIM (Vimentin) | GATGTTTCCAAGCCTGACCT | CACTTCACAGGTGAGGGACT | 216 | 60 |
COL1A1 | GACTGGGAAACCAGATGCTG | GAAGCCTCTCTCTCCTCTCT | 224 | 60 |
COL3A1 | GAAGGAGGATGTTCCCATCT | GACCATTAGGAGGGCGAGTA | 225 | 60 |
MMP1 | GACTGGGAAACCAGATGCTG | GGTGAATGTCAGAGGTGTGA | 226 | 60 |