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Table 1 Performance and threshold of the multiplex PCR ctDNA assay for single mutation detection

From: Patient specific circulating tumor DNA fingerprints to monitor treatment response across multiple tumors

ctDNA concentration of standard

0%

0.10%

0.25%

0.50%

1.0%

3.0%

6.0%

10%

15%

 Number of replicates

157

160

160

160

157

155

157

157

157

 Observed allelic frequency

  Mean

0.065

0.122

0.276

0.577

1.132

3.380

6.358

9.858

15.2

  Std. deviation

0.062

0.113

0.168

0.268

0.197

0.466

0.751

0.900

1.142

  Std. error of mean

0.005

0.009

0.013

0.021

0.016

0.037

0.060

0.072

0.091

  Lower 95% CI of mean

0.055

0.105

0.250

0.536

1.101

3.306

6.239

9.716

15.080

  Upper 95% CI of mean

0.075

0.140

0.302

0.619

1.163

3.454

6.476

10.000

15.440

  Minimum

0

0

0

0.020

0.660

2.100

4.740

7.660

11.690

  25% percentile

0.010

0.030

0.123

0.373

1.010

3.050

5.800

9.290

14.310

  Median

0.050

0.070

0.285

0.555

1.110

3.410

6.310

9.760

15.260

  75% percentile

0.105

0.208

0.400

0.760

1.255

3.670

6.950

10.380

15.930

  Maximum

0.230

0.410

0.760

1.430

1.770

4.940

8.200

14.430

18.490

  Coefficient of variation

96.6%

92.2%

60.8%

46.4%

17.4%

13.8%

11.8%

9.1%

7.5%

  Sensitivity (%, threshold = 0.127%)

NA

40.6%

75.0%

96.3%

100.0%

100.0%

100.0%

100.0%

100.0%

  1. NA not applicable