Table 2 Functional annotation of identified motifs and their functional gene ontology based conserved domain identification among all the selected corona virus spike proteins
Sl. no. | Motif width | Function annotation through BLAST | Percent identity in BLAST (%) | Percent identity with the accession no. | Functional gene ontology based domain identification by interproscan |
|---|---|---|---|---|---|
1 | 49 | Spike protein [Human betacoronavirus 2c EMC/2012] | 75.51 | AGO06003.1 | IPR002552 (CORONA_S2), PF01601 (CORONA_S2) |
2 | 50 | Spike structural protein [Longquan Aa mouse coronavirus] | 91.84 | AID16631.1 | IPR002552 (Corona_S2), PF01601 (CORONA_S2), SSF111474 (Coronavirus _S2 glycoprotein) |
3 | 41 | Spike glycoprotein S [SARS coronavirus BJ182-4] | 85.00 | ACB69883.1 | |
4 | 50 | Spike glycoprotein [Middle East respiratory syndrome-related coronavirus] | 74.00 | AOR17480.1 | |
5 | 50 | Spike protein [Human coronavirus NL63] | 64.00 | AAY43188.1 | IPR002552 (Corona_S2), PF01601 (CORONA_S2), |
6 | 34 | Spike protein [Bat SARS-like coronavirus] | 73.53 | AVP78031.1 | |
7 | 25 | Spike protein [Human coronavirus OC43] | 88.00 | AWW13559.1 | Not detected |