Primer denotation
|
Sequence (5′ to 3′)
|
Specificity
|
GenBank accession number
|
Location
|
Product size (bp)
|
---|
E1-s(= E1-seq)
|
TCCATAGAGAGGCCAGCACAA
|
D
|
AJ252314
|
5′UTR − 152 to − 132
|
340
|
E1-a
|
GCTATTTGCTCCTGTGACCACTT
|
D
|
Z97363
|
+40 to +18
| |
E2-s
|
TGACGAGTGAAACTCTATCTCGAT
|
D
|
U66341
|
-1060 to -1037
|
1602
|
E2-a
|
GGCATGTCTATTTCTCTCTGTCTAAT
|
D/CE
|
U66341, AB035189
|
+355 to +330
| |
E2-seq
|
CCTGGATTCCTTGTGATACACG
|
D/CE
|
U66341, U66340
|
+227 to +206
| |
E3-s
|
GTCGTCCTGGCTCTCCCTCTCT
|
D
|
AB035190
|
− 29 to − 8
|
219
|
E3-a
|
CTTTTCTCCCAGGTCCCTCCT
|
D/CE
|
AB035192, AB035191
|
+39 to +19
| |
E3-seq
|
GGTCCCTCCTCCCAGCAC
|
D/CE
|
AB035192, AB035191
|
+28 to +11
| |
E4-s
|
GCCGACACTCACTGCTCTTAC
|
D/CE
|
U77079, U77078
|
− 36 to − 16
|
378
|
E4-a
|
TGAACCTGCTCTGTGAAGTGC
|
D
|
Y10605
|
+194 to +174
| |
E4-seq
|
GGGAGATTTTTTCAGCCAG
|
D/CE
|
Y10605, Y10604
|
+82 to +64
| |
E5-s
|
TACCTTTGAATTAAGCACTTCACAG
|
D
|
Y10605
|
− 267 to − 243
|
1458
|
E5-a
|
TTATTGGCTACTTGGTGCC
|
D/CE
|
Z97334, AB035197
|
+1024 to +1006
| |
E5-seq
|
AGACCTTTGGAGCAGGAGTG
|
D/CE
|
Y10605, Y10604
|
− 53 to − 34
| |
E6-s(= E6-seq)
|
CAGGGTTGCCTTGTTCCCA
|
D/CE
|
Z97334, Z97333
|
− 95 to − 97
|
274
|
E6-a
|
CTTCAGCCAAAGCAGAGGAGG
|
D
|
Z97334
|
+41 to +21
| |
E7-s
|
TGCCCATCCCCCTTTGGTGGCC
|
D
|
Z97334
|
− 106 to − 85
|
411
|
E7-a
|
CCAAGGTAGGGGCTGGACAG
|
D
|
AB035194
|
+171 to +152
| |
E7-seq
|
GTCTCACCTGCCAATCTGCT
|
D/CE
|
Z97334, Z97333
|
− 41 to − 22
| |
E8-s
|
GGTCAGGAGTTCGAGATCAC
|
D
|
AB035194
|
− 593 to − 574
|
770
|
E8-a(= E8-seq)
|
GATGGGGCACATAGACATCC
|
D/CE
|
AB035196
|
+97 to +78
| |
E9-s(= E9-seq)
|
GGTCCAGGAATGACAGGGCT
|
D
|
AB035196
|
− 162 to − 143
|
530
|
E9-a
|
CGCTGAGGACTGCAGATAGG
|
D
|
AB035185
|
+294 to +275
| |
E10-s
|
CAAGAGATCAAGCCAAAATCAGT
|
D/CE
|
AB035185, AB035184
|
− 67 to − 45
|
381
|
E10-a
|
AGCTTACTGGATGACCACCA
|
D
|
X63097
|
+290 to +271
| |
E10-seq
|
CAGTCTGTTGTTTACCAGATGTTGTTAT
|
D
|
X63097
|
3′UTR +261 to +234
| |
- Primers cited from [24]
- s sense primer, a antisense primer, seq sequencing primer