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Table 4 Summary statistics for identified InDels for LG50 tumor tissue, primary cell line and PDX xenografts

From: Establishment of lung cancer patient-derived xenograft models and primary cell lines for lung cancer study

Samples

Total InDels

Fraction of InDels in dbSNP (%)

Fraction of InDels in 1000 genomes (%)

Novel

Homozygous

Heterozygous

Intron

5′ UTRs

3′ UTRs

Upstream

Down stream

Intergenic

Patient tumor tissue

15,964

80.62

60.42

2728

6044

9920

13,059

234

664

340

296

339

Primary cell line

14,176

82.15

60.77

2223

5567

8609

11,616

195

561

264

242

309

PDX tumor tissue

14,958

78.09

57.28

2223

5379

9579

12,205

214

616

273

259

328