Profiling and bioinformatics analyses reveal differential circular RNA expression in radioresistant esophageal cancer cells

Su, Huafang; Lin, Fuqiang; Deng, Xia; Shen, Lanxiao; Fang, Ya; Fei, Zhenghua; Zhao, Lihao; Zhang, Xuebang; Pan, Huanle; Xie, Deyao; Jin, Xiance; Xie, Congying

doi:10.1186/s12967-016-0977-7

Table 1 Upregulated circRNAs in the KYSE-150R compared with KYSE-150

From: Profiling and bioinformatics analyses reveal differential circular RNA expression in radioresistant esophageal cancer cells

ProbeID	CircRNA	Genesymbol	Chrom	FC (abs)
ASCRP000770	hsa_circRNA_100385	PRRX1	chr1(+):170688866170695542	41.06
ASCRP005230	hsa_circRNA_104983	NHS	chrX(+):1770586117710588	11.69
ASCRP000189	hsa_circRNA_001059	LIN52	chr14(+):7455167774551959	6.16
ASCRP001355	hsa_circRNA_100984	FOXRED1	chr11(+):126142863126143349	5.96
ASCRP000752	hsa_circRNA_100367	DCAF8	chr1(−):160206924160231148	5.62
ASCRP004073	hsa_circRNA_103783	NSUN2	chr5(−):66233266625782	5.19
ASCRP000699	hsa_circRNA_100312	MAN1A2	chr1(+):117944807117984947	5.04
ASCRP005194	hsa_circRNA_104947	PRRC2B	chr9(+):134330462134334743	3.67
ASCRP000700	hsa_circRNA_100313	MAN1A2	chr1(+):117957334117963271	3.46
ASCRP003691	hsa_circRNA_103393	CCDC66	chr3(+):5662699756628056	3.40
ASCRP002905	hsa_circRNA_102592	MYH14	chr19(+):5072087150721028	3.34
ASCRP004116	hsa_circRNA_103826	ZNF131	chr5(+):4316135043162033	3.18
ASCRP004597	hsa_circRNA_104334	MPP6	chr7(+):2466328424708279	3.10
ASCRP004358	hsa_circRNA_104084	LINC00340	chr6(+):2202056722056919	2.96
ASCRP003426	hsa_circRNA_103122	DONSON	chr21(−):3495360734958487	2.91
ASCRP000085	hsa_circRNA_000629	KIF18B	chr17(−):4301230343012398	2.88
ASCRP000698	hsa_circRNA_100311	MAN1A2	chr1(+):117944807117948267	2.88
ASCRP003235	hsa_circRNA_102928	RHBDD1	chr2(+):227729319227779067	2.86
ASCRP001219	hsa_circRNA_100845	MARK2	chr11(+):6366263063663105	2.83
ASCRP002541	hsa_circRNA_102213	USP36	chr17(−):7682332676825089	2.69
ASCRP002519	hsa_circRNA_102191	HN1	chr17(−):7314276073144766	2.67
ASCRP000062	hsa_circRNA_000543	MALAT1	chr11(+):6527249065272586	2.59
ASCRP000292	hsa_circRNA_001543	RSBN1L	chr7(+):7737874077387395	2.58
ASCRP004442	hsa_circRNA_104169	SOBP	chr6(+):107824860107827631	2.56
ASCRP003692	hsa_circRNA_103394	APPL1	chr3(+):5727688357301820	2.54
ASCRP004877	hsa_circRNA_104624	PCMTD1	chr8(−):5277340452773806	2.51
ASCRP000286	hsa_circRNA_001506	LAPTM4A	chr2(−):2024080920240905	2.49
ASCRP001133	hsa_circRNA_100759	DENND5A	chr11(−):92252069229179	2.38
ASCRP001576	hsa_circRNA_101213	RAN	chr12(+):131357380131357465	2.35
ASCRP001668	hsa_circRNA_101309	TMCO3	chr13(+):114188359114193822	2.35
ASCRP003134	hsa_circRNA_102825	RAB3GAP1	chr2(+):135883750135884226	2.33
ASCRP002340	hsa_circRNA_102003	USP22	chr17(−):2091020820914622	2.30
ASCRP004596	hsa_circRNA_104333	MPP6	chr7(+):2466328424690331	2.30
ASCRP000391	hsa_circRNA_100001	SAMD11	chr1(+):871151874792	2.28
ASCRP002927	hsa_circRNA_102614	ASAP2	chr2(+):94909369499018	2.26
ASCRP001679	hsa_circRNA_101320	PRMT5	chr14(−):2339534123396023	2.26
ASCRP002384	hsa_circRNA_102049	TADA2A	chr17(+):3579783835800763	2.25
ASCRP005237	hsa_circRNA_104990	POLA1	chrX(+):2482801424844718	2.25
ASCRP005013	hsa_circRNA_104763	UBAP2	chr9(−):3395328233996331	2.23
ASCRP002333	hsa_circRNA_101996	SPECC1	chr17(+):2010764520109225	2.23
ASCRP003820	hsa_circRNA_103522	FXR1	chr3(+):180685838180688146	2.21
ASCRP001777	hsa_circRNA_101418	CEP128	chr14(−):8129748681307112	2.18
ASCRP002683	hsa_circRNA_102364	DYM	chr18(−):4678337946808545	2.18
ASCRP003659	hsa_circRNA_103361	SMARCC1	chr3(−):4771968747727660	2.18
ASCRP000064	hsa_circRNA_000554	PRB4	chr12(−):1119961811248400	2.17
ASCRP001819	hsa_circRNA_101468	TJP1	chr15(−):3005334130092905	2.16
ASCRP005238	hsa_circRNA_104991	POLA1	chrX(+):2482801424861794	2.15
ASCRP001818	hsa_circRNA_101467	TJP1	chr15(−):3005334130065560	2.13
ASCRP003032	hsa_circRNA_102720	RTN4	chr2(−):5521462655214834	2.12
ASCRP000314	hsa_circRNA_001676	PPP1R12A	chr12(−):8018015380183460	2.11
ASCRP003844	hsa_circRNA_103546	LPP	chr3(+):188202379188242575	2.09
ASCRP001842	hsa_circRNA_101491	MAPKBP1	chr15(+):4210308042105299	2.09
ASCRP002653	hsa_circRNA_102334	SS18	chr18(−):2361236223637706	2.07
ASCRP003119	hsa_circRNA_102810	RALB	chr2(+):121036193121047333	2.06
ASCRP002883	hsa_circRNA_102570	ERCC2	chr19(−):4586052745860957	2.05
ASCRP004893	hsa_circRNA_104640	CSPP1	chr8(+):6801813968028357	2.04
ASCRP003216	hsa_circRNA_102908	BARD1	chr2(−):215632205215646233	2.01

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