Genotypes |
n (%) |
P
*
| Alleles |
n (frequency) |
P°
|
---|
NEO (n = 15) | MTS (n = 10) | CTR (n = 33) | NEO (2n = 30) | MTS (2n = 20) | CTR (2n = 66) |
---|
FcγRIIIA 158V>F | | | | FcγRIIIA 158V>F | | |
V/V | 4 (26.7) | 3 (30.0) | 6 (18.2) | 0.741 | V | 13 (0.43) | 8 (0.40) | 26 (0.39) | 0.934 |
V/F | 5 (33.3) | 2 (20.0) | 14 (42.4) | | F | 17 (0.57) | 12 (0.60) | 40 (0.60) | |
F/F | 6 (40.0) | 5 (50.0) | 13 (39.4) | | | | | | |
HWE
|
P = 0.213
|
P = 0.065
|
P = 0.522
| | | | | | |
FcγRIIA 131H>R | | | | FcγRIIA 131H>R | | |
H/H | 3 (20.0) | 4 (40.0) | 9 (27.3) | 0.499 | H | 14 (0.47) | 10 (0.50) | 35 (0.53) | 0.843 |
H/R | 8 (53.3) | 2 (20.0) | 17 (51.5) | | R | 16 (0.53) | 10 (0.50) | 31 (0.47) | |
R/R | 4 (26.7) | 4 (40.0) | 7 (21.2) | | | | | | |
HWE
|
P = 0.782
|
P = 0.058
|
P = 0.845
| | | | | | |
- Genotyping of FcγRIIIA 158V>F was performed by a newly developed PSQ method after pre-amplification of FcγRIIIA gene. Genotyping of FcγRIIA 131H>R was performed by T-ARMS PCR and SBT. Conventionally, the 158V>F variant corresponds to the G>T SNP [i.e. guanine corresponding to valine (V) and thymine corresponding to phenylalanine (F)] and the 131H>R SNP corresponds to the A>G SNP [i.e. adenine corresponding to histidine (H) and guanine corresponding to arginine (R)]
- Comparison of FcγR genotypic and allelic frequencies between patients and control subjects was estimated using the Pearson’s χ2 test (P* value) and the Fisher’s test (P° value), respectively. Statistical significance: P < 0.05
-
NEO neoadjuvant, MTS metastatic, CTR controls, HWE Hardy–Weinberg equilibrium. HWE was tested by the Pearson’s χ2 test (P < 0.05 indicates lack of HWE)