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Table 3 Chromosome 10q22.1 STR haplotypes linked to p.P240L of CDH23

From: Strong founder effect of p.P240L in CDH23 in Koreans and its significant contribution to severe-to-profound nonsyndromic hearing loss in a Korean pediatric population

Haplotype

STR marker genotype

Korean chromosome

D10S584

D10S1650

D10S606

D10S1694

P240L (n = 7)

Control (n = 80)

1

184

138

238

149

6* (4)**

0**

2

184

138

236

155

1

0

3

182

136

230

139

0

4

4

184

138

238

147

0

2*

5

184

138

238

145

0

2*

6

184

138

230

139

0

2

7

184

138

234

141

0

2

8

184

134

238

147

0

2

9

184

136

238

139

0

2

10

184

134

234

147

0

2

11

184

130

230

139

0

2

12

190

134

234

147

0

2

13

184

138

238

139

0

1*

14

184

138

238

141

0

1*

15

184

138

238

153

0

1*

16

184

138

240

149

0

1

17

184

138

232

145

0

1

18

184

138

236

147

0

1

19

184

138

236

145

0

1

20–69

–

–

–

–

0

51

  1. * Meiotic phase and chromosomes in SH56-103 and SH97-211(SHJ71) and in most of the normal hearing controls could not be decisively assigned due to lack of parental DNA samples: In these cases, genotype contributions were compared among subjects, not chromosomes as described [23] (p > 0.001 by Fisher exact test). Haplotypes of normal controls were constructed in a conservative way where the haplotype closest to the haplotype 1 (see above) was preferentially assumed from STR genotyping data. **The number in parenthesis indicates a genotype contribution among chromosomes confirmed through checking parental samples (p > 0.001 by Fisher exact test).