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Table 5 MILANO analysis for oncogenes and tumor suppressor genes

From: Transcriptional patterns, biomarkers and pathways characterizing nasopharyngeal carcinoma of Southern China

Gene symbol

Role1

Fold difference2 (NPC/NP)

Description

Map Location

MIF

Candidate oncogene

10.72

macrophage migration inhibitory factor (glycosylation-inhibiting factor)

22q11.23

BIRC5

Oncogene

6.62

baculoviral IAP repeat-containing 5 (survivin)

17q25

PTTG1

Proto-oncogene

7.35

pituitary tumor-transforming 1

5q35.1

CCND2

Proto-oncogene

20.15

cyclin D2

12p13

ATM

Tumor suppressor

0.27

ataxia telangiectasia mutated (includes complementation groups A, C and D)

11q22-q23

FOXO1A

Tumor suppressor

0.20

forkhead box O1A (rhabdomyosarcoma)

13q14.1

TGFBR2

Tumor suppressor

0.19

transforming growth factor, beta receptor II

3p22

PRKAR1A

Tumor suppressor

0.17

protein kinase, cAMP-dependent, regulatory, type I, alpha

17q23-q24

KLF5

Tumor suppressor

0.17

Kruppel-like factor 5 (intestinal)

13q22.1

PDCD4

Tumor suppressor

0.10

programmed cell death 4 (neoplastic transformation inhibitor)

10q24

  1. 1 Role: functions identified by MILANO
  2. 2 Fold difference: extracted from our microarray data.