Haplotype of gene Nedd4 binding protein 2 associated with sporadic nasopharyngeal carcinoma in the Southern Chinese population

Table 3 Candidate SNPs

Number	RefSNP	Contig Position	Variant Alleles	Amino acid change	MAF	HWpval	Genotyped (%)
SNP1	RS17439810	39867905	C, G	Gln104Glu	0.058	0.195	74.0
SNP2	loc123-e3l-snp2	39868005	A, G	Met171Val	0.271	0.999	81.4
SNP3	RS17511578	39868252	A, C	Asn189His	0.063	0.978	74.8
SNP4	RS17585937	39868402	G, A	5'UTR	0.118	1.000	76.2
SNP6	RS17511668-SNP2	39926432	G, A	Glu118Lys	0.067	1.000	89.9
SNP7	RS794001-SNP1	39944127	T, G	intron	0.054	0.562	97.4
SNP9	RS2252352	39950655	T, T	intron	0.368	0.327	96.1
SNP10	RS2271395	39961241	G, A	Ala1587Thr	0.368	1.000	94.8
SNP11	RS1442855	43164843	G, A	intron	0.164	0.946	82.5
SNP12	RS2347044	43273849	A, G	intron	0.225	0.377	96.9

RefSNP(RS), SNP accession ID; HWpval, P value of Hardy-Weinberg equilibrium tests for control subjects; MAF, minor allele frequency; % Genotyped, Percent of samples successfully genotyped. New SNPs are shown in bold.

ISSN: 1479-5876