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Table 4 T-cell epitopes on the basis of minimum IC50 value and antigenic score

From: HCV Envelope protein 2 sequence comparison of Pakistani isolate and In-silico prediction of conserved epitopes for vaccine development

Position

Epitope

Predicted IC50value (nM)

Allele

Antigenic score

Antigen/non-antigen

226

LTPQRMVDY

7.57

A*0101

0.3723

Non-Antigen

237

RLWHYPCTV

0.12

A*0201

0.4100

Antigen

346

FLLLCHPRV

0.17

A*0201

0.0731

Non-Antigen

324

YLYGVGSGM

0.24

A*0201

0.3163

Non-Antigen

307

ALSTGLIHL

0.43

A*0201

0.9005

Antigen

248

TLFKVRMFV

0.86

A*0202

Ă¢Ë†â€™0.1899

Non-Antigen

307

ALSTGLIHL

2.25

A*0202

0.9005

Antigen

65

KLTGCPQRL

3.09

A*0202

Ă¢Ë†â€™0.4238

Non-Antigen

237

RLWHYPCTV

3.46

A*0202

0.4100

Antigen

307

ALSTGLIHL

0.10

A*0203

0.9005

Antigen

65

KLTGCPQRL

0.17

A*0203

Ă¢Ë†â€™0.4238

Non-Antigen

311

GLIHLHQNI

0.17

A*0203

0.2190

Non-Antigen

314

HLHQNIVDV

1.19

A*0203

0.5275

Antigen

312

LIHLHQNIV

3.80

A*0206

0.0960

Non-Antigen

248

TLFKVRMFV

7.45

A*0206

Ă¢Ë†â€™0.1899

Non-Antigen

57

GLFYYHKFK

0.25

A*0301

Ă¢Ë†â€™0.0505

Non-Antigen

93

NITGPSDDK

0.47

A*0301

0.0978

Non-Antigen

243

CTVNFTLFK

3.16

A*0301

0.1623

Non-Antigen

132

VVVGTTDPK

2.88

A*1101

1.8674

Antigen

172

SMNSTGFVK

3.30

A*1101

0.3124

Non-Antigen

305

MPALSTGLI

4.62

B*07

0.3991

Non-Antigen

355

CVALWLMLM

6.58

B*07

Ă¢Ë†â€™0.0937

Non-Antigen

335

WAFKWEFVI

7.59

B*51

1.3516

Antigen

86

WGPLTDANI

8.69

B*51

0.8344

Antigen

  1. Non-Antigens are shown in bold text.