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Table 1 PBMC treated with IFN/ribavirin.

From: Suppression of ribosomal protein synthesis and protein translation factors by Peg-interferon alpha/ribavirin in HCV patients blood mononuclear cells (PBMC)

Day 1 enrichment

# of genes

Pathway

SIZE

FDR q-val

KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY

31

0.00

KEGG_RIG_I_LIKE_RECEPTOR_SIGNALING_PATHWAY

40

0.00

KEGG_PROTEASOME

41

0.02

KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY

70

0.02

KEGG_LYSOSOME

88

0.04

KEGG_TRYPTOPHAN_METABOLISM

17

0.04

KEGG_COMPLEMENT_AND_COAGULATION_CASCADES

21

0.06

KEGG_CITRATE_CYCLE_TCA_CYCLE

25

0.09

KEGG_CHEMOKINE_SIGNALING_PATHWAY

104

0.15

KEGG_LEISHMANIA_INFECTION

51

0.15

KEGG_SNARE_INTERACTIONS_IN_VESICULAR_TRANSPORT

27

0.21

KEGG_APOPTOSIS

64

0.20

KEGG_PPAR_SIGNALING_PATHWAY

26

0.20

Day 1 down regulated

  

KEGG_RIBOSOME

76

0.14

Day 2 enrichment

  

KEGG_RIG_I_LIKE_RECEPTOR_SIGNALING_PATHWAY

40

0.00

KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY

31

0.00

KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY

69

0.00

KEGG_LYSOSOME

88

0.02

KEGG_COMPLEMENT_AND_COAGULATION_CASCADES

23

0.04

KEGG_PROTEASOME

41

0.06

KEGG_CHEMOKINE_SIGNALING_PATHWAY

103

0.08

KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION

95

0.12

KEGG_NOD_LIKE_RECEPTOR_SIGNALING_PATHWAY

37

0.15

KEGG_SNARE_INTERACTIONS_IN_VESICULAR_TRANSPORT

27

0.15

KEGG_APOPTOSIS

65

0.19

Day 2 down regulated

  

KEGG_RIBOSOME

76

0.15

Day 7 enrichment

  

KEGG_RIG_I_LIKE_RECEPTOR_SIGNALING_PATHWAY

39

0.00

KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY

30

0.00

KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY

66

0.09

KEGG_APOPTOSIS

61

0.15

Day 7 down regulated

  

KEGG RIBOSOME

76

0.20

Day 14 enrichment

  

KEGG_RIG_I_LIKE_RECEPTOR_SIGNALING_PATHWAY

39

0.00

KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY

31

0.00

KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY

67

0.13

KEGG_COMPLEMENT_AND_COAGULATION_CASCADES

21

0.18

KEGG_PROTEASOME

41

0.22

Day 14 down regulated

  

KEGG_RIBOSOME

76

0.18

Day 28 enrichment

  

KEGG_RIG_I_LIKE_RECEPTOR_SIGNALING_PATHWAY

38

0.00

KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY

30

0.00

Day 28 down regulated

  

KEGG_RIBOSOME

76

0.25

  1. 68 patients