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Table 4 Association of CDKN2A methylation and clinico-pathological features stratified by microsatellite instability (MSI) status

From: Characterization of CDKN2A(p16) methylation and impact in colorectal cancer: systematic analysis using pyrosequencing

Feature

 

CDKN2A in MSS/MSI-L (n;%)

P-value

CDKN2A in MSI-H (n;%)

P-value

  

Negative

Positive

 

Negative

Positive

 
  

(n = 272; 81.4%)

(n = 62; 18.6%)

 

(n = 42; 68.9%)

(n = 19; 31.2%)

 

Age

Mean (range)

69.5 (40–95)

69.9 (44–88)

0.788

68.4 (45–87)

68.2 (50–89)

0.9897

Tumor size

Mean (range)

48.0 (5–130)

49.8 (4–105)

0.523

54.9 (19–160)

62.8 (15–170)

0.3737

Tumor location

Left-sided

193 (71.2)

34 (54.8)

0.0125

24 (57.1)

4 (22.2)

0.013

 

Right-sided

78 (28.8)

28 (45.2)

 

18 (42.9)

14 (77.8)

 

Gender

Female

149 (54.8)

34 (54.8)

0.9932

20 (47.6)

10 (52.6)

0.7169

 

Male

123 (45.2)

28 (45.2)

 

22 (52.4)

9 (47.4)

 

Histological subtype

Non-mucinous

253 (93.0)

54 (87.1)

0.1142

39 (92.9)

16 (84.2)

0.2863

 

Mucinous

16 (5.9)

8 (12.9)

 

3 (7.1)

2 (10.5)

 

Tumor grade

G1-2

261 (98.1)

54 (87.1)

<0.0001

37 (88.1)

14 (73.7)

0.2608

 

G3

5 (1.9)

8 (12.9)

 

5 (11.9)

5 (26.3)

 

pT classification

pT1-2

59 (22.1)

13 (21.0)

0.8354

12 (28.6)

0 (0.0)

0.0093

 

pT3-4

207 (77.8)

49 (79.0)

 

30 (71.4)

19 (100.0)

 

pN classification

pN0

140 (53.4)

23 (37.1)

0.0207

26 (66.7)

10 (52.6)

0.3012

 

pN1-2

122 (46.6)

39 (62.9)

 

13 (33.3)

9 (47.4)

 

Vascular invasion

Absent

186 (69.9)

37 (59.7)

0.1193

35 (83.3)

11 (57.9)

0.0326

 

Present

80 (30.1)

25 (40.3)

 

7 (16.7)

8 (42.1)

 

Invasive margin

Pushing

69 (26.0)

12 (19.7)

0.2996

26 (61.9)

6 (31.6)

0.0281

 

Infiltrating

196 (74.0)

49 (80.3)

 

16 (38.1)

13 (68.4)

 

Peritumoral lymphocytic inflammation

Absent

211 (79.3)

51 (82.3)

0.6037

27 (64.3)

13 (68.4)

0.7529

 

Present

55 (20.7)

11 (17.7)

 

15 (35.7)

6 (31.6)

 

KRAS (codon 12/13)

Wild-type

185 (69.0)

41 (68.3)

0.9161

26 (65.0)

14 (93.3)

0.0356

 

Mutation

83 (31.0)

19 (31.7)

 

14 (35.0)

1 (6.7)

 

BRAF (codon V600E)

Wild-type

245 (96.8)

42 (75.0)

<0.0001

30 (79.0)

8 (44.4)

0.0098

 

Mutation

8 (3.2)

14 (25.0)

 

8 (21.0)

10 (55.6)