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Table 2 The differently expressed proteins (DEPs) that were validated using immunohistochemistry (all up regulated) (unstable/stable)

From: Characterization of the proteome of stable and unstable carotid atherosclerotic plaques using data-independent acquisition mass spectrometry

Protein name

Accession

Gene symbol

FC (discovery)

FC (validation)

P –value (discovery)

P-value (validation)

Solute carrier family 1, member 5

Q15758

SLC1A5

2.76987

1.97175

1.67E-09

0.00948

Apoptosis-inducing factor 2

Q9BRQ8

AIFM2

2.06379

1.55662

0.00016

0.02345

Interacting-domain death agonist

A8ASI8

BID

5.40286

1.51099

5.47E-15

0.01129

Dipeptidyl peptidase 4

P27487

DPP4

2.46589

1.70935

2.55E-09

0.00178

Transferrin receptor protein

Transferrin

Glutamate--cysteine ligase catalytic

P02786

P02787

B4E2I4

TFR1

TF

GCLC

2.29554

2.07101

2.51450

1.74235

1.75609

1.38121

2.58E-07

6.16E-06

2.95E-10

0.02189

0.01332

0.04928

Cholesteryl ester transfer protein

Apolipoprotein A-V

A0A0S2Z3F6

A0A0B4RUS7

CETP

APOA5

3.55635

2.19130

1.23646

1.74603

1.37E-09

1.36E-14

0.24549

0.00567