Table 1 List of notations and abbreviations used
From: Pancancer network analysis reveals key master regulators for cancer invasiveness
TR | Transcription regulator |
|---|---|
MR | Master Regulator |
GRN | Gene Regulatory Network |
INV | Immunologic Constant of Rejection |
NES | Normalized Enrichment Score |
MRA | Master Regulator Analysis |
TCGA | The Cancer of Genome Atlas |
PRECOG | Prediction of Clinical Outcomes for Genomics profiles |
RGBM | Regularized Gradient Boosting Machines |
GSEA | Gene Set Enrichment Analysis |
FGSEA | Fast Gene Set Enrichment Analysis |
GSVA | Gene Set Variation Analysis |
VIPER | Virtual inference of protein activity by enriched regulons |
INV-H | Highest expression of INV genes |
INV-L | Lowest expression of INV genes |
INV-M | Medium expression of INV genes |