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Fig. 6 | Journal of Translational Medicine

Fig. 6

From: HiTIMED: hierarchical tumor immune microenvironment epigenetic deconvolution for accurate cell type resolution in the tumor microenvironment using tumor-type-specific DNA methylation data

Fig. 6

Independently of the tumor type TCGA samples can be classified by HiTIMED immune hot and cold subtypes, angiogenic hot and cold subtypes, and immune and angiogenic hot and cold subtypes. Uniform Manifold Approximation and Projection for Dimension Reduction (UMAP) clustering was used to classify the samples based on the HiTIMED TME cell composition, colored by tumor type and the angiogenic/immune classification. Please refer to the Abbreviations section for acronyms

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