Table 3 Classification of previously known and unknown lncRNA into three types of motifs
Type of motif | Previously known (K) lncRNAs forming triplex structure | Previously unknown [UK] and known [K] (predicted from our study) | ||
|---|---|---|---|---|
lncRNA name | Number of TFO | lncRNA name | Number of TFO | |
R | MEG3 [20] | 10 | MEG3 [K] | 3 |
HOTAIR [45] | 3 | HOTAIRM1 [UK] | 6 | |
FENDRR [16] | ~1 | ATXN8OS [UK] | 10 | |
BCYRN1 [UK] | 6 | |||
Y | DHFR [17] | ~1 | TINCR [UK] | 32 |
OTX2-AS1 [UK] | 2825 | |||
LINC00599 [UK] | 37 | |||
M | – | – | NEAT1 [UK] | 596 |
SNHG16 [UK] | 204 | |||
SCARNA9 [UK] | 63 | |||
FMR1-AS1 [UK] | 118 | |||