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Table 1 HLA transgenic mouse strains used and associated MUC1 peptides

From: Identification of new MUC1 epitopes using HLA-transgenic animals: implication for immunomonitoring

Mouse HLA

Identified peptide

AA position in the MUC1 proteina

Identification method

References

HLA-A*01

is E mflqi Y

1123–1131

Binding assay

[13]

HLA-A*02

stappvhn V

950–958

Prediction program

[22]

s L sytnpa V

1240–1248

Binding assay

[13]

l L ltvlt V

14–21

Prediction program

[23]

v L vcvlva L

1165–1173

New

 

HLA-B*07

a P dnrpa L

941–948

New

 

HLA-B*27

r R knygqldi F

1187–1197

New

 

HLA-B*35

f P ardtyhp M

1197–1206

New

 

HLA-C*07

difp A rdt Y

1195–1203

New

 
  1. Anchor residues are in bold
  2. aPeptide numbering is based on the Uniprot sequence P15941-1 refered to as the canonical sequence