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Table 4 SNP allele frequency comparison between cases and controls

From: Haplotype of gene Nedd4 binding protein 2 associated with sporadic nasopharyngeal carcinoma in the Southern Chinese population

Number

Name

Major Alleles

Case, Control Ratiosa

Chi square

P value

SNP1

loc123-e3l-snp1

C, C

772:42 452:34

1.864

0.1722

SNP2

loc123-e3l-snp2

A, A

570:224 472:164

1.051

0.3053

SNP3

loc123-e3l-snp3

G, G

659:51 572:32

1.960

0.1615

SNP4

LOC344967

G, G

634:74 546:84

2.658

0.1031

SNP6

RS17511668-SNP2

G, G

802:66 670:40

2.419

0.1199

SNP7

RS794001-SNP1

T, T

890:48 728:44

0.282

0.5954

SNP9

RS2252352

T, T

574:320 493:301

0.809

0.3684

SNP 10

RS2271395

A, A

599:331 452:282

1.410

0.2350

SNP 11

RS1442855

G, G

646:128 565:109

0.035

0.8513

SNP 12

RS2347044

A, A

712:212 607:171

0.225

0.6351

  1. a Case, Control Ratios = the frequency of Major Alleles: the frequency of Minor Alleles