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Table 3 Comparison of predicted and pathologic response in test set.

From: Predictors of primary breast cancers responsiveness to preoperative Epirubicin/Cyclophosphamide-based chemotherapy: translation of microarray data into clinically useful predictive signatures

Case

Tumor reduction,%

Response, pathologic

Predicted response PCA cross validated by k-NN

Predicted response PLS-DA model 1

Predicted response PLS-DA model 2

BC1843

0

NC

NC

NC

PR

BC1850

0

NC

NC

NC

NC

BC1862

0

NC

NC

NC

PR

BC1871

10

NC

NC

NC

PR

BC1869

100

pCR

CR

CR

CR

BC1864

100

pCR

CR

CR

CR

BC1421

100

pCR

CR

CR

CR

BC1870

100

cCR

CR

CR

CR

BC1861

40

PR

PR

CR

CR

BC1879

47

PR

PR

NC

NC

BC1866

40

PR

PR

CR

CR

BC1837

90

PR

CR

CR

CR

BC1838

80

PR

PR

NC

NC

BC1842

92

PR

PR

PR

PR

BC1834

0

PR

PR

PR

CR

BC1858

0

PR

NC

NC

NC

BC1880

40

PR

PR

PR

PR

BC1881

62

PR

NC

PR

PR

BC1849

22

PR

NC

NC

PR

BC1839

10

PR

NC

NC

PR

BC1513

33

PR

PR

NC

PR

BC1877

50

PR

PR

NC

NC

BC1853

0

NC

NC

NC

NC

BC1448

68

PR

CR

CR

CR

BC1134

5

NC

NC

NC

NC

BC1840

25

PR

NC

NC

NC

BC1848

85

PR

CR

CR

CR

  1. Note: complete pathologic response shown as CR when predicted.