Sample | Consequence | Type of SV1 | Transcript1::Transcript22 | Start-Stop (GRCh38 coordinates) | Pathological diagnosis |
---|---|---|---|---|---|
P2233_115T | ETV6::NTRK3 | BND | ENST00000396373.8|5/7::ENST00000626019.2|12/18 | chr12:11880139-chr15:88000019 | ATRT |
P7708_114T | C11orf95::RELA | DUP | ENST00000433688.2|3/5::ENST00000406246.7|2/11 | chr11:63764600-chr11:65662555 | Ependymoma |
P7708_115T | C11orf95::RELA | double BND | ENST00000433688.2|3/5::ENST00000406246.7|2/11 | chr11:63764612-chr11:65662560 | Ependymoma |
P7708_201T | C11orf95::RELA | DUP | ENST00000433688.2|2/5::ENST00000406246.7|2/11 | chr11:63765733-chr11:65663414 | Ependymoma |
P7708_109T | GADL1::RBMS3 | INV | ENST00000282538.9|12/15::ENST00000636680.1|6/17 | chr3:29516136-chr3:30793136 | Ependymoma |
 | SYNPO2::HELQ | INV | ENST00000307142.8|1/5::ENST00000295488.7|9/18 | chr4:83435026-chr4:118898900 |  |
P7708_116T | ARHGEF2::NTRK1 | INV + DEL | ENST00000673475.1|25/26::ENST00000524377.6|12/17 | chr1:155949192-chr1:156875269 | Ganglioglioma |
P2233_118T | RERE::SLC2A5 | DUP | ENST00000337907.7|2/24::ENST00000377424.9|12/12 | chr1:8739338-chr1:9087076 | Â |
P2233_119T | KIAA1549::BRAF | DUP | ENST00000422774.2|16/20::ENST00000288602.11|9/19 | chr7:138852276-chr7:140790556 | Pilocytic astrocytoma |
P4551_213T | KIAA1549::BRAF | double INV DUP | ENST00000422774.2|16/20::ENST00000644969.2|9/20 | chr7:138852518-chr7:140791970 | Pilocytic astrocytoma |
P2233_108T | KIAA1549::BRAF | DUP | ENST00000422774.2|16/20::ENST00000644969.2|9/20 | chr7:138852755-chr7:140789812 | Pilocytic astrocytoma |
P2233_110T | KIAA1549::BRAF | DUP | ENST00000422774.2|16/20::ENST00000644969.2|9/20 | chr7:138853500-chr7:140792494 | Pilocytic astrocytoma |
P4552_104T | KIAA1549::BRAF | DUP | ENST00000422774.2|16/20::ENST00000644969.2|9/20 | chr7:138854568-chr7:140790408 | Pilocytic astrocytoma |
P2233_103T | KIAA1549::BRAF | DUP | ENST00000422774.2|16/20::ENST00000644969.2|9/20 | chr7:138856929-chr7:140789598 | Pilocytic astrocytoma |
P7708_104T | KIAA1549::BRAF | DUP | ENST00000422774.2|16/20::ENST00000644969.2|9/20 | chr7:138858793-chr7:140791924 | Pilocytic astrocytoma |
P4552_106T | KIAA1549::BRAF | DUP | ENST00000422774.2|16/20::ENST00000644969.2|9/20 | chr7:138859026-chr7:140791514 | Pilocytic astrocytoma |
P4552_105T | KIAA1549::BRAF | DUP | ENST00000422774.2|16/20::ENST00000644969.2|9/20 | chr7:138860733-chr7:140788171 | Pilocytic astrocytoma |
P4551_217T | KIAA1549::BRAF | DUP | ENST00000422774.2|15/20::ENST00000644969.2|9/20 | chr7:138862714-chr7:140787922 | Pilocytic astrocytoma |
P4552_108R | KIAA1549::BRAF | DUP | ENST00000422774.2|15/20::ENST00000644969.2|9/20 | chr7:138863829-chr7:140793843 | Pilocytic astrocytoma |
P4551_215T | KIAA1549::BRAF | DUP | ENST00000422774.2|15/20::ENST00000644969.2|9/20 | chr7:138867796-chr7:140792603 | Pilocytic astrocytoma |
P4551_216T | KIAA1549::BRAF | DUP | ENST00000422774.2|12/20::ENST00000644969.2|9/20 | chr7:138878216-chr7:140787971 | Pilocytic astrocytoma |
P4551_219T | EWSR1::PATZ1 | INV | ENST00000414183.6|9/18::ENST00000266269.10|1/5 | chr22:29289872-chr22:31344672 | Pilocytic astrocytoma |
P4552_110T | QKI::RAF1 | BND | ENST00000361752.8|3/18::ENST00000442415.7|8/18 | chr6:163496728-chr3:12604073 | Pilocytic astrocytoma |
P7708_105T | FGFR1::TACC1 | INV | ENST00000425967.7|18/19::ENST00000317827.9|7/13 | chr8:38413736-chr8:38835597 | Oligodendroglioma |
P4551_218T | FGFR1::TACC1 | INV | ENST00000425967.7|18/19::ENST00000317827.9|7/13 | chr8:38413197-chr8:38833204 | Pilocytic astrocytoma anaplastic |
P2233_101T | PLEKHA5::PIK3C2G | DUP | ENST00000429027.6|3/32::ENST00000676171.1|19/33 | chr12:18476311-chr12:19180500 | PNET |
P2233_106T | ABL1::FLJ37453 | BND | ENST00000372348.7|1/11::ENST00000317122.2|2/2 | chr9:130847932-chr1:15838837 | Rhabdoid meningioma |
 | GABRA5::NTRK3 | INV | ENST00000400081.7|3/11::ENST00000626019.2|9/19 | chr15:26871512-chr15:88134456 |  |
 | MOCOS::ELP2 | DUP | ENST00000261326.6|6/15::ENST00000442325.6|21/23 | chr18:36168162-chr18:36205353 |  |