Table 1 IDC and SLE expression profile data sets from GEO database
Database (IDC/SLE) | Dataset ID | Platform | Number | Type | Tissue (IDC/Normal) | Age (years) | Gender | Disease severity | ||
|---|---|---|---|---|---|---|---|---|---|---|
IDC/SLE | Normal | |||||||||
IDC | GSE29044 | GPL570 | 67 | 36 | mRNA | Tumor/Normal breast | 20–35 | 10 | NA | ▲Grade N/A: 7 Grade1: 3 Grade2: 52 Grade3: 41 |
36–45 | 46 | |||||||||
46–55 | 16 | |||||||||
 > 55 | 30 | |||||||||
62 | 1 | |||||||||
IDC | GSE21422 | GPL570 | 5 | 5 | mRNA | Tumor/Healthy breast | NA | NA | NA | |
IDC | GSE22840 | GPL570 | 14 | 4 | mRNA | Tumor/Normal breast | NA | NA | NA | |
IDC | GSE15852 | GPL96 | 35 | 43 | mRNA | Tumor/Normal breast | 52(47,54) | NA | Normal: 43 Grade1: 5 Grade2: 18 Grade3: 12 | |
IDC | GSE9309 | GPL887 | 116 | 9 | mRNA | Tumor/Breast nontumor part | NA | Female: 125 | NA | |
Male: 0 | ||||||||||
SLE | GSE154851 | GPL16699 | 38 | 32 | mRNA | Whole blood | 33(30,36) | Female: 68 | NA | |
Male: 2 | ||||||||||
SLE | GSE99967 | GPL21970 | 42 | 17 | mRNA | Peripheral blood | 31(28.9,34) | Female: 48 | SLIDAI of 42 patients: 12(10,16) | |
Male: 11 | ||||||||||
SLE | GSE61635 | GPL570 | 99 | 30 | mRNA | Blood | NA | NA | NA | |
SLE | GSE50635 | GPL6244 | 33 | 16 | mRNA | Whole blood | 46(43,53) | Female: 49 | NA | |
Male: 0 | ||||||||||
SLE | GSE17755 | GPL1291 | 22 | 45 | mRNA | Peripheral blood | 34(31,39) | Female: 44 | NA | |
Male:23 | ||||||||||