SNP | CHR | Position (GRCh37) | MAF | Gene | Location | Minor allele | SNP × HIV | SNP | HIV | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|
β valuea | Adjusted P valuea | β valuea | Adjusted P valuea | β valuea | Adjusted P valuea | |||||||
Among all participants | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â |
rs78012168 | 3 | 156,150,321 | 0.098 | KCNAB1 | Intronic | A | 0.09 | 7.49E−06 | − 0.1 | 1.69E−04 | 0.04 | 3.48E−05 |
rs1194716 | 10 | 54,196,773 | 0.199 | DKK1 | Intergenic | T | 0.06 | 1.17E−05 | − 0.08 | 4.74E−05 | 0.03 | 4.10E−03 |
rs4814734 | 20 | 1,889,477 | 0.333 | SIRPA | Intronic | T | 0.05 | 1.33E−05 | − 0.06 | 1.98E−04 | 0.02 | 8.50E−02 |
rs13096737 | 3 | 10,016,911 | 0.073 | EMC3 | Intronic | C | − 0.07 | 9.95E−04 | 0.14 | 5.38E−06 | 0.07 | 5.58E−13 |
rs2302786 | 3 | 9,979,660 | 0.199 | CRELD1 | Intronic | G | − 0.05 | 1.26E−03 | 0.09 | 8.71E−06 | 0.07 | 9.41E−13 |
rs3774207 | 3 | 9,985,656 | 0.200 | CRELD1 | Synonymous | T | − 0.04 | 2.20E−03 | 0.08 | 2.45E−05 | 0.07 | 1.91E−12 |
rs3755783 | 3 | 10,029,289 | 0.167 | EMC3 | Intronic | G | − 0.04 | 5.90E−03 | 0.09 | 6.36E−05 | 0.07 | 3.60E−12 |
rs6786636 | 3 | 10,045,703 | 0.170 | EMC3 | 3′-UTR | C | − 0.04 | 6.44E−03 | 0.09 | 4.89E−05 | 0.07 | 2.67E−12 |
rs3732968 | 3 | 10,013,273 | 0.149 | EMC3 | Intronic | G | − 0.04 | 1.72E−02 | 0.09 | 2.35E−04 | 0.06 | 1.63E−11 |
rs13146599 | 4 | 92,348,857 | 0.114 | CCSER1 | Intronic | A | − 0.04 | 2.21E−02 | 0.09 | 2.35E−04 | 0.06 | 1.63E−11 |
rs8058808 | 16 | 87,839,943 | 0.052 | SLC7A5 | Intergenic | A | − 0.05 | 3.45E−02 | 0.12 | 4.17E−04 | 0.06 | 1.94E−11 |
rs10856885 | 4 | 92,309,543 | 0.130 | CCSER1 | Intronic | C | − 0.03 | 4.29E−02 | 0.08 | 1.06E−03 | 0.06 | 5.64E−11 |
Among participants under 45Â years old | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â |
rs9932976 | 16 | 6,505,665 | 0.119 | RBFOX1 | Intronic | C | − 0.09 | 3.47E−07 | 0.14 | 1.20E−08 | 0.1 | 1.38E−27 |
rs9938274 | 16 | 6,505,208 | 0.118 | RBFOX1 | Intronic | T | − 0.09 | 4.00E−07 | 0.14 | 1.67E−08 | 0.1 | 9.96E−28 |
rs1345439 | 16 | 48,751,012 | 0.133 | CBLN1 | Intergenic | A | 0.08 | 6.33E−07 | − 0.1 | 1.94E−05 | 0.06 | 6.29E−10 |
rs2507941 | 3 | 37,536,056 | 0.064 | ITGA9 | Synonymous | T | 0.12 | 8.42E−07 | − 0.14 | 7.37E−05 | 0.07 | 7.07E−15 |
rs6762348 | 3 | 96,683,649 | 0.058 | EPHA6 | Intronic | G | 0.12 | 1.93E−06 | − 0.12 | 2.80E−04 | 0.07 | 3.48E−15 |
rs62263680 | 3 | 96,627,491 | 0.057 | EPHA6 | Intronic | C | 0.12 | 2.45E−06 | − 0.12 | 3.71E−04 | 0.07 | 2.98E−15 |
rs62262941 | 3 | 96,570,987 | 0.057 | EPHA6 | Intronic | C | 0.12 | 3.13E−06 | − 0.12 | 4.77E−04 | 0.07 | 2.15E−15 |
rs77741796 | 12 | 80,815,650 | 0.054 | PTPRQ | Intergenic | T | 0.11 | 8.89E−06 | − 0.09 | 1.18E−02 | 0.07 | 2.67E−16 |
rs148420952 | 4 | 171,482,271 | 0.051 | LINC01612 | Intergenic | T | 0.11 | 4.05E−05 | − 0.09 | 1.21E−02 | 0.07 | 1.53E−16 |
rs35812497 | 5 | 108,563,812 | 0.089 | FER, PJA2 | Intergenic | A | 0.08 | 1.14E−04 | − 0.07 | 1.53E−02 | 0.07 | 1.04E−13 |
rs10847321 | 12 | 127,782,099 | 0.056 | LINC02376 | Intergenic | A | 0.09 | 1.69E−04 | − 0.07 | 3.06E−02 | 0.07 | 4.96E−16 |
rs111815403 | 11 | 2,553,341 | 0.061 | KCNQ1 | Intronic | A | 0.07 | 2.11E−03 | − 0.04 | 2.65E−01 | 0.07 | 1.65E−16 |
Among participants above 45Â years old | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â |
rs11948504 | 5 | 166,997,147 | 0.068 | TENM2 | Intronic | G | 0.19 | 7.16E−06 | − 0.21 | 2.72E−04 | − 0.01 | 9.34E−01 |
rs2430722 | 12 | 15,122,111 | 0.255 | PDE6H | Intergenic | C | − 0.07 | 3.53E−03 | 0.08 | 1.37E−02 | 0.06 | 4.32E−03 |
rs35129955 | 4 | 181,960,818 | 0.054 | LINC00290 | Intergenic | C | 0.12 | 6.55E−03 | − 0.11 | 6.05E−02 | 0.01 | 6.22E−01 |
rs36130341 | 7 | 343,194 | 0.273 | FAM20C | Intergenic | A | 0.05 | 1.60E−02 | − 0.06 | 6.79E−02 | − 0.01 | 6.80E−01 |
rs6858162 | 4 | 40,555,674 | 0.050 | RBM47 | Intronic | T | 0.11 | 1.76E−02 | − 0.09 | 1.72E−01 | 0.01 | 5.00E−01 |
rs9851984 | 3 | 193,090,806 | 0.382 | ATP13A5 | Intronic | G | − 0.04 | 5.62E−02 | 0.03 | 3.18E−01 | 0.05 | 2.23E−02 |