Fig. 3
From: The intrarenal landscape of T cell receptor repertoire in clear cell renal cell cancer
The V-J and V-D-J combination usage patterns for TRA and TRB in ccRCC and peritumour tissue. A, C, E Heatmaps showing the hierarchical clustering of the differentially expressed percentage of V-J for TRA and TRB and V-D-J for TRB in peritumour and ccRCC tissue. B, D, F Volcano plots showing upregulate V-J and V-D-J combinations in ccRCC compared with peritumour tissue (red plots). G, H, I Comparison of V-J clonotypes for TRA and TRB and V-D-J clonotypes for TRB in peritumour and ccRCC tissue. Student’s t-test is used to compare the distinct gene, V-J gene, and V-D-J gene between the peritumour and ccRCC group. Red plot in volcano pot: P value < 0.05; Grey plot in volcano pot: *P value < 0.05; **P value < 0.01; ***P value < 0.001; ns, not significant