Table 3 Summary of in silico functional analysis on LD (r2 ≥ 0.6) block for top associated SNPs
From: Polygenic risk of paclitaxel-induced peripheral neuropathy: a genome-wide association study
SNP | rs9846958 | rs117158921 | rs4560447 | rs200091415 |
|---|---|---|---|---|
Closest gene | GADL1 | AC124254.2 | LIMCH1 | FAM238B |
SNPs in LD 28 | 2 | 0 | 18 | 27 |
eQTL | None | None | LIMCH1 | PDSS1, FAM238B |
Expression in dorsal root ganglia | Minimal | ND | Yes | Minimal for PDSS1 |