Block | SNP | Gene | A1/A2a | MAF | MAF case | MAF control | MAF CHS | ORb | 95% CIb | P valueb |
---|---|---|---|---|---|---|---|---|---|---|
1 | rs142577772 | GNL1 | T/C | 0.085 | 0.297 | 0.049 | 0.033 | 11.36 | (7.18–15.12) | 1.45E-34 |
(3’ UTR) | ||||||||||
2 | rs7756294 | – | A/G | 0.131 | 0.381 | 0.089 | 0.067 | 8.31 | (5.95–11.76) | 7.48E-33 |
(intergenic) | ||||||||||
3 | rs2073716 | CCHCR1 | G/C | 0.206 | 0.432 | 0.168 | 0.186 | 3.92 | (2.79–4.80) | 7.56E-21 |
(intron) | ||||||||||
4 | rs76977405 | – | G/T | 0.110 | 0.372 | 0.066 | 0.043 | 15.27 | (9.27–19.45) | 1.67E-42 |
(intergenic) | ||||||||||
5 | rs7766452 | HLA-B | A/G | 0.088 | 0.372 | 0.041 | 0.014 | 34.17 | (17.73–41.22) | 1.72E-51 |
(intron) | ||||||||||
6 | rs9368671 | HLA-B | T/C | 0.300 | 0.504 | 0.266 | 0.219 | 3.40 | (2.54–4.33) | 9.82E-19 |
(intron) | ||||||||||
7 | rs28862571 | HLA-B | T/C | 0.151 | 0.415 | 0.107 | 0.086 | 10.14 | (6.43–12.75) | 2.35E-36 |
(intron) | ||||||||||
8 | rs9266267 | – | C/A | 0.123 | 0.392 | 0.078 | 0.057 | 20.68 | (13.20–29.62) | 8.23E-46 |
(intergenic) | ||||||||||
9 | rs6936035 | AL671883.3 | G/A | 0.286 | 0.556 | 0.241 | 0.195 | 4.46 | (3.81–6.83) | 7.33E-25 |
(intron) | ||||||||||
10 | rs2251396 | MICA | A/G | 0.314 | 0.517 | 0.280 | 0.286 | 3.33 | (2.37–3.94) | 6.43E-19 |
(intron) | ||||||||||
11 | rs3094228 | HCP5 | C/T | 0.229 | 0.458 | 0.190 | 0.138 | 4.36 | (3.19–5.65) | 1.19E-22 |
(intron) | ||||||||||
12 | rs9688839 | HCP5 | G/A | 0.169 | 0.364 | 0.136 | 0.086 | 4.18 | (2.74–4.78) | 1.07E-21 |
(intron) |