Table 2 Gene amplifications
Gene | Samples (n) | Sample codes | Average fold change |
|---|---|---|---|
RPS6KB1 | 12 | 1, 3, 5, 7, 8, 10, 11, 12, 15, 16, 55, 56 | 1.6 |
EGFR | 9 | 2, 5, 8, 13, 15, 60, 61, 63, 65 | 1.6 |
BRAF | 6 | 1, 5, 12, 13, 15, 61 | 1.5 |
ALK | 4 | 5, 8, 10, 13 | 1.5 |
ERBB2 | 4 | 5, 12, 13, 55 | 1.9 |
FGF1 | 4 | 2, 4, 60, 61 | 1.6 |
FGFR1 | 4 | 2, 5, 13, 16 | 4.5 |
CCND3 | 3 | 2, 10, 16 | 1.5 |
CDK4 | 3 | 3, 61, 63 | 9.1 |
ERCC2 | 3 | 3, 5, 55 | 1.9 |
FGF10 | 3 | 3, 60, 61 | 1.7 |
FGF7 | 3 | 3, 15, 55 | 1.4 |
KIT | 3 | 12, 13, 65 | 1.5 |
PDGFRA | 3 | 5, 8, 12 | 1.5 |
RAF1 | 3 | 2, 5, 13 | 1.6 |
ERCC1 | 2 | 3, 5 | 2.0 |
FGF2 | 2 | 8, 12 | 1.5 |
LAMP1 | 2 | 5, 61 | 1.6 |
MET | 2 | 13, 61 | 1.5 |
PDGFRB | 2 | 60, 61 | 1.7 |
PIK3CA | 2 | 5, 16 | 1.7 |
AR | 1 | 3 | 1.5 |
BRCA2 | 1 | 2 | 1.4 |
CCND1 | 1 | 63 | 10.6 |
CDK6 | 1 | 61 | 1.6 |
ERBB3 | 1 | 63 | 2.8 |
FGF19 | 1 | 63 | 8.8 |
FGF23 | 1 | 3 | 1.5 |
FGF3 | 1 | 63 | 10.3 |
FGF4 | 1 | 63 | 10.3 |
FGFR2 | 1 | 5 | 2.1 |
FGFR4 | 1 | 61 | 1.9 |
JAK2 | 1 | 2 | 2.5 |
KRAS | 1 | 3 | 1.4 |
MDM2 | 1 | 63 | 5.6 |
MDM4 | 1 | 15 | 1.5 |
MYC | 1 | 3 | 26.5 |
MYCL | 1 | 16 | 4.0 |
RICTOR | 1 | 61 | 1.7 |
TFRC | 1 | 5 | 3.1 |