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Table 1 Summary of patient and tumor characteristics

From: The tumor immune microenvironment of primary and metastatic HER2− positive breast cancers utilizing gene expression and spatial proteomic profiling

Patient

Tissue

Diagnosis

ER(%)/PR(%)/HER2( +)

PAM50 Subtype

TIS Status

Treatment at the time of sample collection

1

Breast

IDC, DCIS

2/0/3

Luminal A

High

Gemcitabine and trastuzumab

1

Breast

Tumor emboli

N/A

Luminal A

High

Nab-paclitaxel and trastuzumab

1

Lung

Metastatic

0/0/3

HER2 enriched

High

Nab-paclitaxel and trastuzumab

2

Breast

ICD, DCIS

0/0/3

HER2 enriched

Low

None. Initial diagnosis

2

Breast

Residual IDC

0/0/N/A

HER2 enriched

High

TDM1, pertuzumab, doxorubicin and cyclophosphamide*

2

Soft tissue

Local recurrence

0/0/3

HER2 enriched

Low

Trastuzumab and pertuzumab

3

Brain

Metastatic

15/0/3

HER2 enriched

Low

None. Discontinued due to toxicities

4

Breast

IDC

0/0/3

Basal like

High

None. Initial diagnosis

4

Breast

Local recurrence

N/A

Luminal A

High

Doxorubicin, cyclophosphamide, paclitaxel and trastuzumab

5

Brain

Metastatic

0/0/3

Basal like

Low

TDM1 and anastrozole

6

Breast

IDC, DCIS

80/70/2**

Luminal A

High

None. Initial diagnosis

7

Breast

IDC, DCIS

0/0/3

HER2 enriched

High

None. Initial diagnosis

7

Breast

Local recurrence

N/A

Basal like

High

None. Completed neoadjuvant and adjuvant therapy

8

Breast

IDC, DCIS

10/15/1

Luminal A

Low

None. Initial diagnosis

8

Soft tissue

Local recurrence

0/0/3

Basal like

Low

Nab-paclitaxel and atezolizumab (previously had triple negative disease)

  1. DCIS: ductal carcinoma in situ; DCIS: ductal carcinoma in situ; ER: estrogen receptor; HER2: human epidermal growth factor 2; IDC: invasive ductal carcinoma; IDC: invasive ductal carcinoma; PR: progesterone receptor; TDM1: ado-trastuzumab emtansine; TIS: tumor inflammation score
  2. *Neoadjuvant therapy in the ISPY2 clinical trial
  3. **HER2/CEP17 ratio: 2.13 (amplified by FISH)