Skip to main content

Table 1 Characteristics in the primary and validation datasets

From: Deep learning-based predictive biomarker of pathological complete response to neoadjuvant chemotherapy from histological images in breast cancer

Factors

Primary dataset

P

Validation dataset

P

pCR (n  =  81)

Non-pCR (n  =  352)

pCR (n  =  21)

Non-pCR (n  =  86)

Age at diagnosis (%)

 < 50

46 (56.8)

209 (59.4)

0.708

11 (52.4)

48 (55.8)

0.811

 ≥ 50

35 (43.2)

143 (40.6)

10 (47.6)

38 (44.2)

Menopausal status (%)

 Premenopausal

45 (55.6)

221 (62.8)

0.255

10 (47.6)

49 (56.9)

0.472

 Postmenopausal

36 (44.4)

131 (37.2)

11 (52.4)

37 (43.1)

T stage (%)

 T1–T2

39 (48.1)

161 (45.7)

0.712

11 (52.4)

39 (45.3)

0.630

 T3–T4

42 (51.9)

191 (54.3)

10 (47.6)

47 (54.7)

N stage (%)

 N0

8 (9.9)

32 (9.1)

1.000

0 (0.0)

5 (5.8)

1.000

 N1–N3

73 (90.1)

320 (90.9)

21 (100.0)

81 (94.2)

ER status (%)

 Positive

26 (32.1)

243 (69.0)

< 0.001

4 (19.0)

66 (76.7)

< 0.001

 Negative

55 (67.9)

109 (31.0)

17 (81.0)

20 (23.3)

PR status (%)

 Positive

27 (33.3)

231 (65.6)

< 0.001

7 (33.3)

59 (68.6)

0.005

 Negative

54 (66.7)

121 (34.4)

14(66.7)

27 (31.4)

HER2 status (%)

 Positive

44 (54.3)

75 (21.3)

< 0.001

15 (71.4)

17 (19.8)

< 0.001

 Negative

37 (45.7)

277 (78.7)

6 (28.6)

69 (80.2)

Subtype (%)

 HR + /HER2 −

16 (19.8)

223 (63.4)

< 0.001

3 (14.3)

59 (68.6)

< 0.001

 HR + /HER2 + 

20 (24.7)

40 (11.4)

5 (23.8)

11 (12.8)

 HR −/HER2 −

21 (25.9)

54 (15.3)

3 (14.3)

10 (11.6)

 HR −/HER2 + 

24 (29.6)

35 (9.9)

10 (47.6)

6 (7.0)

Ki-67 index (%)

 ≥ 20%

76 (93.8)

296 (84.1)

0.021

20 (95.2)

70 (81.4)

0.184

 < 20%

5 (6.2)

56 (15.9)

1 (4.8)

16 (18.6)

Nuclear grade (%)

 1 or 2

40 (49.4)

252 (71.6)

0.001

11 (52.4)

59 (68.6)

0.202

 3

41 (51.6)

100 (28.4)

10 (47.6)

27 (31.4)

sTILs (%)

 Low

31 (38.3)

207 (58.8)

0.001

4 (19.0)

57 (66.3)

0.001

 Moderate

44 (54.3)

136 (38.6)

14 (66.7)

26 (30.2)

 High

6 (7.4)

9 (2.6)

3 (14.3)

3 (3.5)

Necrosis (%)

 Yes

22 (27.2)

67 (19.0)

0.126

6 (28.6)

13 (14.9)

0.200

 No

59 (72.8)

285 (81.0)

15 (71.4)

74 (85.1)

  1. Bold indicates statistical significance (P  <  0.05)
  2. ER estrogen receptor; PR progesterone receptor; HER2 human epidermal growth factor receptor 2; HR hormone receptor; sTILs stromal tumor-infiltrating lymphocytes; pCR pathological complete response