Gene name | Position | Mutation | Codon change | Amino acids change | No. Italian samples | Reported before |
---|---|---|---|---|---|---|
5′ UTR | 241 | C/T | 21 | Yes | ||
orf1ab nsp1 | 586 | Synonymous | ctT/ctC | L107 | 1 | Yes |
orf1ab nsp2 | 1117 | Synonymous | atT/atC | I104 | 1 | Yes |
orf1ab nsp2 | 1191 | Nonsynonymous | cCa/cTa | P129L | 2 | Yes |
orf1ab nsp2 | 1524 | Nonsynonymous | tGt/tAt | C240Y | 1 | Yes |
orf1ab_nsp2 | 2488 | Synonymous | ttC/ttT | F561 | 1 | No |
orf1ab nsp2 | 2498 | Nonsynonymous | Gaa/Aaa | E565K | 3 | No |
orf1ab nsp3 | 3037 | Synonymous | ttC/ttT | F106 | 21 | Yes |
orf1ab nsp3 | 4235 | Nonsynonymous | Aat/Gat | N506D | 1 | Yes |
orf1ab nsp3 | 4255 | Synonymous | ccG/ccT | P512 | 3 | Yes |
orf1ab nsp3 | 5812 | Synonymous | gaC/gaT | D1031 | 1 | Yes |
orf1ab nsp3 | 6629 | Nonsynonymous | Ctt/Ttt | L1304F | 1 | Yes |
orf1ab nsp3 | 7094 | Nonsynonymous | Act/Gct | T1459A | 1 | No |
orf1ab nsp4 | 9157 | Synonymous | ttT/ttC | F201 | 1 | Yes |
orf1ab nsp6 | 11,008 | Synonymous | caC/caT | H12 | 1 | No |
orf1ab nsp6 | 11,083 | Nonsynonymous | ttG/ttT | L37F | 1 | Yes |
orf1ab nsp12 | 13,748 | Nonsynonymous | Agt/Ggt | S103G | 2 | Yes |
orf1ab nsp12 | 14,408 | Synonymous | Cta/Tta | L323 | 21 | Yes |
orf1ab nsp12 | 15,243 | Nonsynonymous | tGt/tAt | C601Y | 1 | Yes |
orf1ab nsp13 | 16,456 | Nonsynonymous | Tca/Cca | S74P | 1 | Yes |
orf1ab nsp15 | 19,839 | Synonymous | aaT/aaC | N73 | 2 | Yes |
orf1ab nsp15 | 20,380 | Synonymous | Cta/Tta | L254 | 1 | No |
S | 21,566 | Nonsynonymous | Ttt/Ctt | F2L | 1 | No |
S | 21,575 | Nonsynonymous | Ctt/Ttt | L5F | 2 | Yes |
S | 22,629 | Nonsynonymous | aAg/aGg | K356R | 1 | No |
S | 23,403 | Nonsynonymous | gAt/gGt | D614G | 21 | Yes |
S | 23,422 | Synonymous | gtC/gtT | V620 | 2 | Yes |
S | 23,569 | Synonymous | ggT/ggC | G669 | 1 | No |
S | 23,575 | Synonymous | tgC/tgT | C671 | 1 | Yes |
S | 23,589 | Nonsynonymous | aCt/aTt | T676I | 1 | No |
S | 23,675 | Nonsynonymous | Gtt/Ttt | V705F | 1 | Yes |
S | 23,849 | Synonymous | Tta/Cta | L763 | 2 | Yes |
S | 25,135 | Nonsynonymous | aaG/aaT | K1191N | 1 | Yes |
ORF3a | 25,621 | Nonsynonymous | Gtt/Ttt | V77F | 1 | No |
UTR ORF3a-M | 26,522 | C/T | 2 | No | ||
M | 26,530 | Nonsynonymous | gAt/gGt | D3G | 3 | Yes |
M | 26,858 | Synonymous | ttC/ttT | F112 | 1 | Yes |
M | 26,915 | Synonymous | agA/agG | R131 | 1 | No |
M | 27,046 | Nonsynonymous | aCg/aTg | T175M | 1 | Yes |
N | 28,514 | Nonsynonymous | Gat/Tat | D81Y | 1 | Yes |
N | 28,881 | Nonsynonymous | aGG/aAA | R203K | 4 | Yes |
N | 28,882 | Synonymous | AgG/agA | R203 | 4 | Yes |
N | 28,883 | Nonsynonymous | Gga/Cga | G204R | 4 | Yes |
N | 28,902 | Nonsynonymous | aTg/aCg | M210T | 1 | Yes |
N | 28,985 | Nonsynonymous | Ggc/Tgc | G238C | 1 | Yes |
N | 29,009 | Nonsynonymous | Gtc/Atc | V246I | 1 | Yes |
3′ UTR | 29,686 | C/T | 2 | Yes | ||
3′ UTR | 29,823 | T/A | 1 | Yes |