TY - JOUR AU - Bray, F. AU - Ferlay, J. AU - Soerjomataram, I. AU - Siegel, R. L. AU - Torre, L. A. AU - Jemal, A. PY - 2018 DA - 2018// TI - Global cancer statistics 2018: GLOBOCAN estimates of incidence and mortality worldwide for 36 cancers in 185 countries JO - CA Cancer J Clin VL - 68 UR - https://doi.org/10.3322/caac.21492 DO - 10.3322/caac.21492 ID - Bray2018 ER - TY - JOUR AU - Duma, N. AU - Santana-Davila, R. AU - Molina, J. R. PY - 2019 DA - 2019// TI - Non-small cell lung cancer: epidemiology, screening, diagnosis, and treatment JO - Mayo Clin Proc VL - 94 UR - https://doi.org/10.1016/j.mayocp.2019.01.013 DO - 10.1016/j.mayocp.2019.01.013 ID - Duma2019 ER - TY - JOUR AU - Chen, H. AU - Carrot-Zhang, J. AU - Zhao, Y. PY - 2019 DA - 2019// TI - Genomic and immune profiling of pre-invasive lung adenocarcinoma JO - Nat Commun VL - 10 UR - https://doi.org/10.1038/s41467-019-13460-3 DO - 10.1038/s41467-019-13460-3 ID - Chen2019 ER - TY - JOUR AU - Song, A. X. AU - Zeng, Z. AU - Wei, H. PY - 2017 DA - 2017// TI - Alternative splicing in cancers: from aberrant regulation to new therapeutics JO - Semin Cell Dev Biol UR - https://doi.org/10.1016/j.semcdb.2017.09.018 DO - 10.1016/j.semcdb.2017.09.018 ID - Song2017 ER - TY - JOUR AU - Ge, Y. AU - Porse, B. T. PY - 2014 DA - 2014// TI - The functional consequences of intron retention: alternative splicing coupled to NMD as a regulator of gene expression JO - BioEssays VL - 36 UR - https://doi.org/10.1002/bies.201300156 DO - 10.1002/bies.201300156 ID - Ge2014 ER - TY - JOUR AU - Zhou, L. T. AU - Ye, S. H. AU - Yang, H. X. PY - 2017 DA - 2017// TI - A novel role of fragile X mental retardation protein in pre-mRNA alternative splicing through RNA-binding protein 14 JO - Neuroscience VL - 349 UR - https://doi.org/10.1016/j.neuroscience.2017.02.044 DO - 10.1016/j.neuroscience.2017.02.044 ID - Zhou2017 ER - TY - JOUR AU - Yin, J. AU - Luo, W. AU - Zeng, X. PY - 2017 DA - 2017// TI - UXT-AS1-induced alternative splicing of UXT is associated with tumor progression in colorectal cancer JO - Am J Cancer Res VL - 7 ID - Yin2017 ER - TY - JOUR AU - Kozlovski, I. AU - Siegfried, Z. AU - Amar-Schwartz, A. AU - Karni, R. PY - 2017 DA - 2017// TI - The role of RNA alternative splicing in regulating cancer metabolism JO - Hum Genet VL - 136 UR - https://doi.org/10.1007/s00439-017-1803-x DO - 10.1007/s00439-017-1803-x ID - Kozlovski2017 ER - TY - JOUR AU - Wang, B. D. AU - Lee, N. H. PY - 2018 DA - 2018// TI - Aberrant RNA splicing in cancer and drug resistance JO - Cancers (Basel) UR - https://doi.org/10.3390/cancers10110458 DO - 10.3390/cancers10110458 ID - Wang2018 ER - TY - JOUR AU - Siegfried, Z. AU - Karni, R. PY - 2018 DA - 2018// TI - The role of alternative splicing in cancer drug resistance JO - Curr Opin Genet Dev VL - 48 UR - https://doi.org/10.1016/j.gde.2017.10.001 DO - 10.1016/j.gde.2017.10.001 ID - Siegfried2018 ER - TY - JOUR AU - Climente-González, H. AU - Porta-Pardo, E. AU - Godzik, A. AU - Eyras, E. PY - 2017 DA - 2017// TI - The functional impact of alternative splicing in cancer JO - Cell Rep VL - 20 UR - https://doi.org/10.1016/j.celrep.2017.08.012 DO - 10.1016/j.celrep.2017.08.012 ID - Climente-González2017 ER - TY - JOUR AU - Li, Y. AU - Sun, N. AU - Lu, Z. PY - 2017 DA - 2017// TI - Prognostic alternative mRNA splicing signature in non-small cell lung cancer JO - Cancer Lett VL - 393 UR - https://doi.org/10.1016/j.canlet.2017.02.016 DO - 10.1016/j.canlet.2017.02.016 ID - Li2017 ER - TY - JOUR AU - Camacho, D. M. AU - Collins, K. M. AU - Powers, R. K. AU - Costello, J. C. AU - Collins, J. J. PY - 2018 DA - 2018// TI - Next-generation machine learning for biological networks JO - Cell VL - 173 UR - https://doi.org/10.1016/j.cell.2018.05.015 DO - 10.1016/j.cell.2018.05.015 ID - Camacho2018 ER - TY - STD TI - Ryan M, Wong WC, Brown R, et al. TCGASpliceSeq a compendium of alternative mRNA splicing in cancer. Nucleic Acids Res. 2016;44(D1):D1018–D1022. https://doi.org/10.1093/nar/gkv1288 ID - ref14 ER - TY - JOUR AU - Breiman, L. PY - 2001 DA - 2001// TI - Random forests JO - Mach Learn VL - 45 UR - https://doi.org/10.1201/9780367816377-11 DO - 10.1201/9780367816377-11 ID - Breiman2001 ER - TY - JOUR AU - Deng, M. AU - Yu, R. AU - Wang, L. AU - Shi, F. AU - Yap, P. T. AU - Shen, D. PY - 2016 DA - 2016// TI - Learning-based 3T brain MRI segmentation with guidance from 7T MRI labeling JO - Med Phys VL - 43 UR - https://doi.org/10.1118/1.4967487 DO - 10.1118/1.4967487 ID - Deng2016 ER - TY - JOUR AU - Kursa, M. B. AU - Rudnicki, W. R. PY - 2010 DA - 2010// TI - Feature selection with the Boruta package JO - J Stat Softw VL - 36 UR - https://doi.org/10.18637/jss.v036.i11 DO - 10.18637/jss.v036.i11 ID - Kursa2010 ER - TY - JOUR AU - Ishwaran, H. AU - Kogalur, U. B. AU - Blackstone, E. H. AU - Lauer, M. S. PY - 2008 DA - 2008// TI - Random survival forests JO - Ann Appl Stat VL - 2 UR - https://doi.org/10.1214/08-AOAS169 DO - 10.1214/08-AOAS169 ID - Ishwaran2008 ER - TY - JOUR AU - Ruyssinck, J. AU - Herten, J. AU - Houthooft, R. PY - 2016 DA - 2016// TI - Random survival forests for predicting the bed occupancy in the intensive care unit JO - Comput Math Methods Med UR - https://doi.org/10.1155/2016/7087053 DO - 10.1155/2016/7087053 ID - Ruyssinck2016 ER - TY - JOUR AU - HyungJun, C. AU - Ami, Y. AU - Sukwoo, K. AU - Jaewoo, K. AU - Seung-Mo, H. PY - 2009 DA - 2009// TI - Robust likelihood-based survival modeling with microarray data JO - J Stat Softw VL - 29 UR - https://doi.org/10.1002/wics.10 DO - 10.1002/wics.10 ID - HyungJun2009 ER - TY - JOUR AU - Datema, F. R. AU - Moya, A. AU - Krause, P. PY - 2012 DA - 2012// TI - Novel head and neck cancer survival analysis approach: random survival forests versus cox proportional hazards regression JO - Head Neck VL - 34 UR - https://doi.org/10.1002/HED DO - 10.1002/HED ID - Datema2012 ER - TY - JOUR AU - Shannon, P. AU - Markiel, A. AU - Ozier, O. PY - 2003 DA - 2003// TI - Cytoscape: a software environment for integrated models of biomolecular interaction networks JO - Genome Res VL - 13 UR - https://doi.org/10.1101/gr.1239303 DO - 10.1101/gr.1239303 ID - Shannon2003 ER - TY - JOUR AU - Bindea, G. AU - Mlecnik, B. AU - Hackl, H. PY - 2009 DA - 2009// TI - ClueGO: a Cytoscape plug-in to decipher functionally grouped gene ontology and pathway annotation networks JO - Bioinformatics VL - 25 UR - https://doi.org/10.1093/bioinformatics/btp101 DO - 10.1093/bioinformatics/btp101 ID - Bindea2009 ER - TY - JOUR AU - Piva, F. AU - Giulietti, M. AU - Burini, A. B. AU - Principato, G. PY - 2012 DA - 2012// TI - SpliceAid 2: a database of human splicing factors expression data and RNA target motifs JO - Hum Mutat VL - 33 UR - https://doi.org/10.1002/humu.21609 DO - 10.1002/humu.21609 ID - Piva2012 ER - TY - JOUR AU - Yan, Y. AU - Xu, Z. AU - Qian, L. PY - 2019 DA - 2019// TI - Identification of CAV1 and DCN as potential predictive biomarkers for lung adenocarcinoma JO - Am J Physiol Lung Cell Mol Physiol VL - 316 UR - https://doi.org/10.1152/ajplung.00364.2018 DO - 10.1152/ajplung.00364.2018 ID - Yan2019 ER - TY - JOUR AU - Dong, H. X. AU - Wang, R. AU - Jin, X. Y. AU - Zeng, J. AU - Pan, J. PY - 2018 DA - 2018// TI - LncRNA DGCR5 promotes lung adenocarcinoma (LUAD) progression via inhibiting hsa-mir-22-3p JO - J Cell Physiol VL - 233 UR - https://doi.org/10.1002/jcp.26215 DO - 10.1002/jcp.26215 ID - Dong2018 ER - TY - JOUR AU - Haghjoo, N. AU - Moeini, A. AU - Masoudi-Nejad, A. PY - 2020 DA - 2020// TI - Introducing a panel for early detection of lung adenocarcinoma by using data integration of genomics, epigenomics, transcriptomics and proteomics JO - Exp Mol Pathol VL - 112 UR - https://doi.org/10.1016/j.yexmp.2019.104360 DO - 10.1016/j.yexmp.2019.104360 ID - Haghjoo2020 ER - TY - JOUR AU - Ma, B. AU - Geng, Y. AU - Meng, F. AU - Yan, G. AU - Song, F. PY - 2020 DA - 2020// TI - Identification of a sixteen-gene prognostic biomarker for lung adenocarcinoma using a machine learning method JO - J Cancer VL - 11 UR - https://doi.org/10.7150/jca.34585 DO - 10.7150/jca.34585 ID - Ma2020 ER - TY - JOUR AU - Wang, Y. AU - Deng, H. AU - Xin, S. AU - Zhang, K. AU - Shi, R. AU - Bao, X. PY - 2019 DA - 2019// TI - Prognostic and predictive value of three DNA methylation signatures in lung adenocarcinoma JO - Front Genet VL - 10 UR - https://doi.org/10.3389/fgene.2019.00349 DO - 10.3389/fgene.2019.00349 ID - Wang2019 ER - TY - JOUR AU - Kim, E. AU - Goren, A. AU - Ast, G. PY - 2008 DA - 2008// TI - Insights into the connection between cancer and alternative splicing JO - Trends Genet VL - 24 UR - https://doi.org/10.1016/j.tig.2007.10.004 DO - 10.1016/j.tig.2007.10.004 ID - Kim2008 ER - TY - JOUR AU - Oltean, S. AU - Bates, D. O. PY - 2014 DA - 2014// TI - Hallmarks of alternative splicing in cancer JO - Oncogene VL - 33 UR - https://doi.org/10.1038/onc.2013.533 DO - 10.1038/onc.2013.533 ID - Oltean2014 ER - TY - JOUR AU - Taylor, J. K. AU - Zhang, Q. Q. AU - Wyatt, J. R. AU - Dean, N. M. PY - 1999 DA - 1999// TI - Induction of endogenous Bcl-xS through the control of Bcl-x pre-mRNA splicing by antisense oligonucleotides JO - Nat Biotechnol VL - 17 UR - https://doi.org/10.1038/15079 DO - 10.1038/15079 ID - Taylor1999 ER - TY - JOUR AU - Aljada, A. AU - Doria, J. AU - Saleh, A. M. PY - 2016 DA - 2016// TI - Altered Lamin A/C splice variant expression as a possible diagnostic marker in breast cancer JO - Cell Oncol VL - 39 UR - https://doi.org/10.1007/s13402-015-0265-1 DO - 10.1007/s13402-015-0265-1 ID - Aljada2016 ER - TY - JOUR AU - Lung, N. S. AU - De, F. i. g. u. e. i. r. e. d. o. -. p. o. n. t. e. s. L. L. AU - Wong, D. W. PY - 2014 DA - 2014// TI - Identification and characterization of ALK kinase splicing JO - J Thorac Oncol VL - 9 UR - https://doi.org/10.1097/JTO.0000000000000050 DO - 10.1097/JTO.0000000000000050 ID - Lung2014 ER - TY - JOUR AU - Zhao, D. AU - Zhang, C. AU - Jiang, M. PY - 2020 DA - 2020// TI - Survival-associated alternative splicing signatures in non-small cell lung cancer JO - Aging (Albany NY) VL - 12 UR - https://doi.org/10.18632/aging.102983 DO - 10.18632/aging.102983 ID - Zhao2020 ER - TY - JOUR AU - Yang, W. J. AU - Wang, H. B. AU - Da, W. a. n. g. W. PY - 2020 DA - 2020// TI - A network-based predictive gene expression signature for recurrence risks in stage II colorectal cancer JO - Cancer Med VL - 9 UR - https://doi.org/10.1002/cam4.2642 DO - 10.1002/cam4.2642 ID - Yang2020 ER - TY - JOUR AU - Ishwaran, H. AU - Kogalur, U. B. PY - 2007 DA - 2007// TI - Random survival forests for R JO - R News VL - 7 ID - Ishwaran2007 ER - TY - JOUR AU - Miguel, F. J. AU - Pajares, M. J. AU - Martínez-Terroba, E. PY - 2016 DA - 2016// TI - A large-scale analysis of alternative splicing reveals a key role of QKI in lung cancer JO - Mol Oncol VL - 10 UR - https://doi.org/10.1016/j.molonc.2016.08.001 DO - 10.1016/j.molonc.2016.08.001 ID - Miguel2016 ER - TY - JOUR AU - Menardi, G. AU - Torelli, N. PY - 2014 DA - 2014// TI - Training and assessing classification rules with imbalanced data JO - Data Min Knowl Disc. VL - 28 UR - https://doi.org/10.1007/s10618-012-0295-5 DO - 10.1007/s10618-012-0295-5 ID - Menardi2014 ER - TY - JOUR AU - Cen, S. AU - Fu, K. AU - Shi, Y. PY - 2020 DA - 2020// TI - A microRNA disease signature associated with lymph node metastasis of lung adenocarcinoma JO - Math Biosci Eng VL - 17 UR - https://doi.org/10.3934/mbe.2020140 DO - 10.3934/mbe.2020140 ID - Cen2020 ER - TY - JOUR AU - Wang, H. AU - Wu, X. AU - Chen, Y. PY - 2019 DA - 2019// TI - Stromal-immune score-based gene signature: a prognosis stratification tool in gastric cancer JO - Front Oncol VL - 9 UR - https://doi.org/10.3389/fonc.2019.01212 DO - 10.3389/fonc.2019.01212 ID - Wang2019 ER - TY - JOUR AU - Jin, P. AU - Tan, Y. AU - Zhang, W. AU - Li, J. AU - Wang, K. PY - 2020 DA - 2020// TI - Prognostic alternative mRNA splicing signatures and associated splicing factors in acute myeloid leukemia JO - Neoplasia (US) VL - 22 UR - https://doi.org/10.1016/j.neo.2020.06.004 DO - 10.1016/j.neo.2020.06.004 ID - Jin2020 ER - TY - JOUR AU - Mao, S. AU - Li, Y. AU - Lu, Z. PY - 2020 DA - 2020// TI - Systematic profiling of immune signatures identifies prognostic predictors in lung adenocarcinoma JO - Cell Oncol VL - 43 UR - https://doi.org/10.1007/s13402-020-00515-7 DO - 10.1007/s13402-020-00515-7 ID - Mao2020 ER - TY - JOUR AU - Lujan, D. A. AU - Ochoa, J. L. AU - Hartley, R. S. PY - 2018 DA - 2018// TI - Cold-inducible RNA binding protein in cancer and inflammation JO - Wiley Interdiscip Rev RNA VL - 9 UR - https://doi.org/10.1002/wrna.1462 DO - 10.1002/wrna.1462 ID - Lujan2018 ER - TY - JOUR AU - He, R. AU - Zuo, S. PY - 2019 DA - 2019// TI - A robust 8-gene prognostic signature for early-stage non-small cell lung cancer JO - Front Oncol VL - 9 UR - https://doi.org/10.3389/fonc.2019.00693 DO - 10.3389/fonc.2019.00693 ID - He2019 ER - TY - JOUR AU - Crawford, N. P. S. AU - Walker, R. C. AU - Lukes, L. AU - Officewala, J. S. AU - Williams, R. W. AU - Hunter, K. W. PY - 2008 DA - 2008// TI - The Diasporin Pathway: a tumor progression-related transcriptional network that predicts breast cancer survival JO - Clin Exp Metastasis VL - 25 UR - https://doi.org/10.1007/s10585-008-9146-6 DO - 10.1007/s10585-008-9146-6 ID - Crawford2008 ER - TY - JOUR AU - Tufarelli, C. AU - Hardison, R. AU - Miller, W. PY - 2004 DA - 2004// TI - Comparative analysis of the α-like globin clusters in mouse, rat, and human chromosomes indicates a mechanism underlying breaks in conserved synteny JO - Genome Res VL - 14 UR - https://doi.org/10.1101/gr.2143604 DO - 10.1101/gr.2143604 ID - Tufarelli2004 ER - TY - JOUR AU - Cole, K. A. AU - Huggins, J. AU - Laquaglia, M. PY - 2011 DA - 2011// TI - RNAi screen of the protein kinome identifies checkpoint kinase 1 (CHK1) as a therapeutic target in neuroblastoma JO - Proc Natl Acad Sci USA VL - 108 UR - https://doi.org/10.1073/pnas.1012351108 DO - 10.1073/pnas.1012351108 ID - Cole2011 ER - TY - JOUR AU - Ebili, H. O. AU - Iyawe, V. O. AU - Adeleke, K. R. PY - 2018 DA - 2018// TI - Checkpoint kinase 1 expression predicts poor prognosis in Nigerian breast cancer patients JO - Mol Diagn Ther. VL - 22 UR - https://doi.org/10.1007/s40291-017-0302-z DO - 10.1007/s40291-017-0302-z ID - Ebili2018 ER - TY - JOUR AU - Alcaraz-Sanabria, A. AU - Nieto-Jiménez, C. AU - Corrales-Sánchez, V. PY - 2017 DA - 2017// TI - Synthetic lethality interaction between aurora kinases and CHEK1 inhibitors in ovarian cancer JO - Mol Cancer Ther. VL - 16 UR - https://doi.org/10.1158/1535-7163.MCT-17-0223 DO - 10.1158/1535-7163.MCT-17-0223 ID - Alcaraz-Sanabria2017 ER - TY - JOUR AU - Wang, L. AU - Qu, J. AU - Liang, Y. PY - 2020 DA - 2020// TI - Identification and validation of key genes with prognostic value in non-small-cell lung cancer via integrated bioinformatics analysis JO - Thorac Cancer VL - 11 UR - https://doi.org/10.1111/1759-7714.13298 DO - 10.1111/1759-7714.13298 ID - Wang2020 ER -