Skip to main content

Table 3 Spike protein amino acid identity percent among different representative coronaviruses and human SARS-CoV-2

From: Transmission of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) to animals: an updated review

 

1

2

3

4

5

6

7

8

9

10

11

12

13

1-SARS-CoV-2 Reference genome

100

99.84

99.92

99.92

99.92

99.45

72.54

97.41

90.03

92.38

97.91

80.53

75.76

2-Mink SARS-CoV-2/NB04 EPI_ISL_447634

99.84

100

99.92

99.92

99.92

99.29

72.38

97.25

89.87

92.22

79.75

80.38

75.61

3-Dog SARS-CoV-2/HKG/20-03695/2020

99.92

99.92

100

100

100

99.37

72.46

97.33

89.95

92.30

79.83

80.46

75.68

4-Tiger SARS-CoV-2/USA/NY-040420 EPI_ISL_420293

99.92

99.92

100

100

100

99.37

72.46

97.33

89.95

92.30

79.83

80.46

75.68

5-Cat SARS-CoV-2 EPI_ISL_437349

99.92

99.92

100

100

100

99.37

72.46

97.33

89.95

92.30

79.83

80.46

75.68

6-Mouse SARS-CoV-2/HRB-26 m EPI_ISL_459910

99.45

99.29

99.37

99.37

99.37

100

72.51

96.94

89.64

92.38

79.75

80.38

75.61

7-Bat coronavirus RmYN02 EPI ISL 412977

72.54

72.38

72.46

72.46

72.46

72.51

100

72.76

72.76

72.96

76.66

76.66

71.55

8-Bat coronavirus RaTG13

97.41

97.25

97.33

97.33

97.33

96.94

72.76

100

93.14

79.84

80.47

76.31

76.47

9-Pangolin coronavirus EPI ISL 410721

90.03

89.87

89.95

89.95

89.95

89.64

72.76

93.14

100

87.55

85.38

85.93

75.33

10-Pangolin coronavirus PCoV GX-P5L

92.38

92.22

92.30

92.30

92.30

92.38

72.96

79.84

87.55

100

79.75

80.22

76.59

11-Bat SARS-like coronavirus CoVZXC21

97.91

79.75

79.83

79.83

79.83

79.75

76.66

80.47

85.38

79.75

100

98.64

75.00

12-Bat SARS-like coronavirus CoVZC45

80.53

80.38

80.46

80.46

80.46

80.38

76.66

76.31

85.93

80.22

98.64

100

75.31

13-SARS coronavirus civet010

75.76

75.61

75.68

75.68

75.68

75.61

71.55

76.47

75.33

76.59

75.00

75.31

100