Table 2 Spike gene nucleotide identity percent among different representative coronaviruses and human SARS-CoV-2
1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1-SARS-CoV-2 Reference genome | 100 | 99.92 | 99.97 | 99.97 | 99.97 | 99.56 | 72.16 | 92.86 | 83.77 | 83.23 | 74.99 | 75.51 | 72.54 |
2-Mink SARS-CoV-2/NB04 EPI_ISL_447634 | 99.92 | 100 | 99.95 | 99.95 | 99.95 | 99.48 | 72.09 | 92.78 | 83.74 | 83.18 | 74.91 | 75.43 | 72.49 |
3-Dog SARS-CoV-2/HKG/20-03695/2020 | 99.97 | 99.95 | 100 | 100 | 100 | 99.53 | 72.14 | 92.83 | 83.74 | 83.20 | 74.96 | 75.48 | 72.52 |
4-Tiger SARS-CoV-2/USA/NY-040420 EPI_ISL_420293 | 99.97 | 99.95 | 100 | 100 | 100 | 99.53 | 72.14 | 92.83 | 83.74 | 83.20 | 74.96 | 75.48 | 72.52 |
5-Cat SARS-CoV-2 EPI_ISL_437349 | 99.97 | 99.95 | 100 | 100 | 100 | 99.53 | 72.14 | 92.83 | 83.74 | 83.20 | 74.96 | 75.48 | 72.52 |
6-Mouse SARS-CoV-2/HRB-26 m EPI_ISL_459910 | 99.56 | 99.48 | 99.53 | 99.53 | 99.53 | 100 | 72.04 | 92.49 | 83.40 | 83.44 | 74.78 | 75.30 | 72.36 |
7-Bat coronavirus RmYN02 EPI ISL 412977 | 72.16 | 72.09 | 72.14 | 72.14 | 72.14 | 72.04 | 100 | 71.50 | 70.26 | 69.28 | 73.01 | 72.80 | 69.52 |
8-Bat coronavirus RaTG13 | 92.86 | 92.78 | 92.83 | 92.83 | 92.83 | 92.49 | 71.50 | 100 | 83.25 | 82.76 | 75.85 | 76.01 | 72.53 |
9-Pangolin coronavirus EPI ISL 410721 | 83.77 | 83.74 | 83.74 | 83.74 | 83.74 | 83.40 | 70.26 | 83.25 | 100 | 79.69 | 79.17 | 79.44 | 72.19 |
10-Pangolin coronavirus PCoV GX-P5L | 83.23 | 83.18 | 83.20 | 83.20 | 83.20 | 83.44 | 69.28 | 82.76 | 79.69 | 100 | 74.61 | 75.16 | 72.32 |
11-Bat SARS-like coronavirus CoVZXC21 | 74.99 | 74.91 | 74.96 | 74.96 | 74.96 | 74.78 | 73.01 | 75.85 | 79.17 | 74.61 | 100 | 96.95 | 71.83 |
12-Bat SARS-like coronavirus CoVZC45 | 75.51 | 75.43 | 75.48 | 75.48 | 75.48 | 75.30 | 72.80 | 76.01 | 79.44 | 75.16 | 96.95 | 100 | 71.67 |
13-SARS coronavirus civet010 | 72.54 | 72.49 | 72.52 | 72.52 | 72.52 | 72.36 | 69.52 | 72.53 | 72.19 | 72.32 | 71.83 | 71.67 | 100 |