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Table 1 Whole-genome nucleotide identity percent among different representative coronaviruses and human SARS-CoV-2

From: Transmission of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) to animals: an updated review

 

1

2

3

4

5

6

7

8

9

10

11

12

13

1-SARS-CoV-2 Reference genome

100

99.90

99.51

99.96

99.85

99.87

93.06

95.99

89.90

84.84

87.43

87.69

78.20

2-Mink SARS-CoV-2/NB04 EPI_ISL_447634

99.90

100

99.53

99.89

99.78

99.86

93.06

95.99

89.89

84.50

87.37

87.63

78.21

3-Dog SARS-CoV-2/HKG/20-03695/2020

99.51

99.53

100

99.54

99.39

99.50

93.06

95.71

89.62

84.68

87.03

87.28

78.55

4-Tiger SARS-CoV-2/USA/NY-040420 EPI_ISL_420293

99.96

99.89

99.54

100

99.84

99.83

93.07

96.00

89.87

84.82

87.41

87.66

78.20

5-Cat SARS-CoV-2 EPI_ISL_437349

99.85

99.78

99.39

99.84

100

99.72

92.93

95.86

89.76

84.72

87.31

87.56

78.07

6-Mouse SARS-CoV-2/HRB-26 m EPI_ISL_459910

99.87

99.86

99.50

99.83

99.72

100

93.14

96.03

89.98

84.92

87.42

87.68

78.26

7-Bat coronavirus RmYN02 EPI ISL 412977

93.06

93.06

93.06

93.07

92.93

93.14

100

92.35

87.83

82.64

86.42

86.48

77.72

8-Bat coronavirus RaTG13

95.99

95.99

95.71

96.00

95.86

96.03

92.35

100

89.83

84.67

87.36

87.55

78.08

9-Pangolin coronavirus EPI ISL 410721

89.90

89.89

89.62

89.87

89.76

89.98

87.83

89.83

100

84.46

86.39

86.44

77.64

10-Pangolin coronavirus PCoV GX-P5L

84.84

84.50

84.68

84.82

84.72

84.92

82.64

84.67

84.46

100

82.32

82.48

78.04

11-Bat SARS-like coronavirus CoVZXC21

87.43

87.37

87.03

87.41

87.31

87.42

86.42

87.36

86.39

82.32

100

97.24

79.44

12-Bat SARS-like coronavirus CoVZC45

87.69

87.63

87.28

87.66

87.56

87.68

86.48

87.55

86.44

82.48

97.24

100

79.42

13-SARS coronavirus civet010

78.20

78.21

78.55

78.20

78.07

78.26

77.72

78.08

77.64

78.04

79.44

79.42

100