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Table 3 Hub genes with different methods

From: LTBP1 plays a potential bridge between depressive disorder and glioblastoma

MCC

Score

DMNC

Score

EPC

Score

Degree

Score

MNC

Score

Overlapped

COL1A1

Score

COL20A1

0.897868

COL2A1

61.909

COL1A1

30

COL1A1

28

COL1A2

COL3A1

3716032

COL21A1

0.897868

COL5A1

61.909

COL3A1

24

COL3A1

24

COL2A1

COL1A2

3715972

COL24A1

0.88234

COL6A3

61.909

COL1A2

20

COL1A2

19

COL5A1

COL6A3

3715873

COL6A3

0.78828

COL3A1

61.909

COL2A1

19

COL2A1

18

COL12A1

COL12A1

3715201

COL12A1

0.711055

COL1A1

61.909

COL5A1

16

COL5A1

16

COL10A1

COL2A1

3714722

FAP

0.665688

COL1A2

61.909

COL10A1

15

COL12A1

15

COL6A3

COL5A1

3714653

COL5A1

0.646143

COL12A1

61.868

COL12A1

15

COL10A1

14

LUM

COL24A1

3710306

COL10A1

0.641885

COL24A1

61.845

COL6A3

15

COL6A3

14

PCOLCE

COL10A1

3669122

TNXB

0.618139

ASPN

61.839

LUM

15

LUM

14

ASPN

COL21A1

3633873

COL1A2

0.616463

LUM

61.8

PCOLCE

14

PCOLCE

13

COL24A1

COL20A1

3628800

FBLN1

0.612303

PCOLCE

61.754

ASPN

13

ASPN

12

COL20A1

PCOLCE

3628800

PCOLCE

0.587563

COL20A1

61.702

COL24A1

13

COL24A1

11

COL21A1

LUM

80795

DPT

0.583436

COL10A1

61.641

IGF2

12

COL20A1

10

TNMD

ASPN

41431

COL2A1

0.580315

MFAP5

61.501

OPCML

11

COL21A1

10

 

FBLN1

5235

LUM

0.563057

COL21A1

61.432

MKX

10

STMN2

9

 

FAP

846

TNMD

0.525062

TNMD

61.391

COL20A1

10

TNMD

9

 

MFAP5

240

LTBP1

0.51861

MKX

61.365

COL21A1

10

MFAP5

9

 

TNMD

200

SCX

0.51861

FBLN1

61.359

MSX2

9

MKX

8

 

TNXB

192

ASPN

0.512224

GDF5

60.695

STMN2

9

FBLN1

8

 

MKX

144

MFAP5

0.477329

MSX2

60.232

TNMD

9

MSX2

7

 
  1. Hub genes and scores calculated with five different method in Cytohubber APP in Cytoscape, as well as the overlapped hub genes