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Table 1 Primer sequences and amplicon length of the genes studied by qRT-PCR

From: Plasma peroxiredoxin changes and inflammatory cytokines support the involvement of neuro-inflammation and oxidative stress in Autism Spectrum Disorder

Unigene accession no.

Gene ID

Gene

Left primer

Right primer

Amplicon length (bp)

Hs.171189

196

AHR

CTTCCAAGCGGCATAGAGAC

AGTTATCCTGGCCTCCGTTT

198

Hs.274402

3303

HSPA1Aa,b

CCCTGATCAAGCGCAACT

CTCGTACACCTGGATCAGCA

98

Hs.654458

3569

IL6

CAATGAGGAGACTTGCCTGGT

AGCTGCGCAGAATGAGATGA

275

Hs.193717

3586

IL10

GGCGCTGTCATCGATTTCTTC

GCCACCCTGATGTCTCAGTT

181

Hs.126256

3553

IL1 beta

AGCCATGGCAGAAGTACCTG

CCTGGAAGGAGCACTTCATCT

116

Hs.673

3592

IL12A

GCTCCAGAAGGCCAGACAAA

GCCAGGCAACTCCCATTAGT

183

Hs.201978

5742

PTGS1b

AGCTCGTAGGAGAGAAGGAGAT

AGTGTGGCCGTCTTGACAAT

253

Hs.196384

5743

PTGS2b

CAAATTGCTGGCAGGGTTGC

AGGGCTTCAGCATAAAGCGT

139

Hs.432121

7001

PRDX2

ACGAGCATGGGGAAGTTTGT

GCCTTTCCTGGGTCAGCATA

201

Hs.502823

25824

PRDX5

TCTTTGGGAATCGACGTCTC

ATTGCAGAAATCTGGCCAAC

229

Hs.463059

6774

STAT3

CGGAGAAGCATCGTGAGTGA

CTCTTCCAGTCAGCCAGCTC

95

Hs.241570

7124

TNF-alpha

CCCCAGGGACCTCTCTCTAA

TCTCAGCTCCACGCCATT

172

Hs.520640

60

Actin-betac

TGTGGCATCCACGAAACTAC

TGATCTTGATCTTCATTGTGCT

175

Hs.544577

2597

GAPDHc

GGCCTCCAAGGAGTAAGACC

CTGTGAGGAGGGGAGATTCA

130

  1. aThese primers recognize also HSPA1B, a minor isoform of HSPA1A
  2. bHSPA1A, protein name HSP70, inducible form; PTGS1 and PTGS2, protein name COX1 and COX2 (CICLOOXYGENASE 1 AND 2)
  3. cActin-beta and GADPH were the housekeeping genes utilized in the gene expression study