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Table 1 Methylation-driven mRNAs

From: Methylation and transcriptome analysis reveal lung adenocarcinoma-specific diagnostic biomarkers

mRNA

Normal mean

Tumor mean

logFC

P Value

Adjusted-P

Cor

Cor P-value

ECSCR

0.651549745

0.777875207

0.255663395

6.97E−21

1.03E−18

− 0.401694346

1.85E−19

TBX4

0.3491894

0.503087408

0.526799315

7.58E−21

1.12E−18

− 0.353891186

3.64E−15

TIE1

0.559830867

0.675047137

0.269997212

1.21E−20

1.79E−18

− 0.406629901

6.08E−20

NEFH

0.254444122

0.435542374

0.775464224

1.40E−20

2.07E−18

− 0.321798888

1.16E−12

ACVRL1

0.398975345

0.517535129

0.375357195

3.26E−20

4.82E−18

− 0.386877674

4.73E−18

USHBP1

0.419199887

0.525059456

0.324842471

3.63E−20

5.37E−18

− 0.323007247

9.42E−13

ERN2

0.264647925

0.387648278

0.550673914

3.92E−20

5.80E−18

− 0.450728621

1.20E−24

COX7A1

0.560388444

0.666059579

0.249224026

9.41E−20

1.39E−17

− 0.342569242

3.00E−14

SULT1C4

0.176980042

0.3113128

0.814778224

2.45E−19

3.62E−17

− 0.375338318

5.28E−17

ART4

0.531234199

0.652680788

0.297029548

2.53E−19

3.75E−17

− 0.425340294

7.44E−22

HIST1H3E

0.313889479

0.456138176

0.539214244

1.45E−18

2.15E−16

− 0.390470196

2.19E−18

ZNF492

0.077650427

0.196364234

1.33846642

1.18E−17

1.75E−15

− 0.378866342

2.55E−17

ZNF728

0.138731042

0.290955121

1.068506001

1.32E−17

1.95E−15

− 0.346356662

1.50E−14

S1PR1

0.33644215

0.424456445

0.33525806

4.34E−17

6.43E−15

− 0.375495078

5.11E−17

MUC13

0.657841786

0.551979674

− 0.253125507

4.44E−17

6.57E−15

− 0.402604202

1.51E−19

CCDC8

0.360671572

0.480500959

0.413853596

8.99E−17

1.33E−14

− 0.389064482

2.96E−18

ZNF578

0.281145557

0.394615614

0.489130794

1.12E−16

1.66E−14

− 0.459621578

1.11E−25

FES

0.424918825

0.49946057

0.233183531

2.74E−16

4.05E−14

− 0.370960412

1.29E−16

ASCL1

0.096716299

0.200703748

1.053236604

2.98E−16

4.41E−14

− 0.331763879

2.08E−13

ALG1L

0.461379719

0.287062126

− 0.684591589

3.14E−16

4.65E−14

− 0.466908378

1.49E−26

ELF3

0.462412193

0.359973363

− 0.361289285

4.47E−16

6.61E−14

− 0.45067724

1.22E−24

TMEM88

0.583625618

0.738189625

0.338948249

7.89E−16

1.17E−13

− 0.390308898

2.27E−18

GSTM5

0.356896303

0.481942079

0.433354815

1.13E−15

1.68E−13

− 0.353462769

3.95E−15

IRX1

0.098629887

0.220552417

1.161024783

1.21E−15

1.79E−13

− 0.344157687

2.24E−14

ZNF454

0.183616121

0.338501411

0.88246912

1.44E−15

2.13E−13

− 0.602235321

3.13E−47

TK2

0.615291641

0.702921916

0.192094042

1.71E−15

2.52E−13

− 0.365352213

3.94E−16

ZSCAN1

0.289768404

0.400355348

0.466380783

2.83E−15

4.19E−13

− 0.397488998

4.73E−19

ZNF677

0.220497196

0.315626597

0.517458471

2.86E−15

4.23E−13

− 0.527352048

1.21E−34

ZNF582

0.130372053

0.239679107

0.878469505

5.74E−15

8.49E−13

− 0.558968642

1.43E−39

DAPP1

0.510432574

0.394016678

− 0.373463704

1.29E−14

1.91E−12

− 0.490584559

1.57E−29

SRPX2

0.600591335

0.480798168

− 0.32095226

1.42E−14

2.10E−12

− 0.383430149

9.83E−18

CCDC181

0.283605585

0.41823899

0.560441617

3.23E−14

4.78E−12

− 0.319044754

1.84E−12

SULT4A1

0.24652482

0.348099193

0.497765567

7.69E−14

1.14E−11

− 0.358208198

1.59E−15

LRRC4

0.321370351

0.418618502

0.38139924

1.26E−13

1.87E−11

− 0.421045183

2.10E−21

ZSCAN23

0.12251013

0.209336095

0.772920046

1.57E−13

2.32E−11

− 0.362584137

6.80E−16

F2RL1

0.242790645

0.208656331

− 0.218584138

1.74E−13

2.57E−11

− 0.35941342

1.26E−15

ZNF334

0.17466699

0.256829933

0.556206371

2.31E−13

3.43E−11

− 0.459451082

1.16E−25

ZNF471

0.130738051

0.279080546

1.094002465

5.46E−13

8.07E−11

− 0.548011494

8.37E−38

HOXB2

0.34354942

0.513088034

0.578688733

6.70E−13

9.91E−11

− 0.491155695

1.32E−29

PRR19

0.666407262

0.728756031

0.129031796

9.23E−13

1.37E−10

− 0.420836129

2.20E−21

AGR2

0.669953934

0.554274136

− 0.273462209

1.68E−12

2.49E−10

− 0.51205684

1.93E−32

NQO1

0.702158099

0.525979398

− 0.416789616

2.08E−12

3.08E−10

− 0.425444078

7.26E−22

GIPC2

0.179310415

0.281572165

0.651045433

3.52E−12

5.21E−10

− 0.36721046

2.73E−16

OXT

0.553265288

0.656785573

0.247451026

4.61E−12

6.83E−10

− 0.519344744

1.77E−33

B3GALT2

0.534256964

0.658626901

0.301927631

6.78E−12

1.00E−09

− 0.477778193

6.83E−28

EFS

0.197613625

0.297157242

0.588544115

1.42E−11

2.10E−09

− 0.391422631

1.78E−18

RAB34

0.295528869

0.254270265

− 0.21693631

2.05E−11

3.03E−09

− 0.424411453

9.32E−22

ACTRT3

0.391186063

0.353188058

− 0.147418408

5.54E−11

8.21E−09

− 0.329154572

3.27E−13

CLDN8

0.727830255

0.618464903

− 0.234910297

9.70E−11

1.44E−08

− 0.328690081

3.55E−13

AQP1

0.366569984

0.501482299

0.452110121

2.34E−10

3.46E−08

− 0.597245937

2.74E−46

SP8

0.202841356

0.297916967

0.554558466

2.69E−10

3.98E−08

− 0.317009628

2.58E−12

HORMAD2

0.350476203

0.461146819

0.395909658

3.14E−10

4.65E−08

− 0.457907737

1.76E−25

GALM

0.255948625

0.226747119

− 0.174770041

6.86E−10

1.02E−07

− 0.356239606

2.33E−15

RABGGTB

0.47835678

0.385164319

− 0.312612985

6.89E−10

1.02E−07

− 0.3330019

1.67E−13

KCNE3

0.256671142

0.314316199

0.292295525

7.52E−10

1.11E−07

− 0.350037722

7.53E−15

ZNF879

0.147629821

0.2000367

0.438280535

1.01E−09

1.50E−07

− 0.453856587

5.23E−25

ZNF257

0.157589016

0.245609973

0.640202155

1.28E−09

1.89E−07

− 0.359120932

1.34E−15

ZNF382

0.101492

0.295488981

1.541738316

1.35E−09

1.99E−07

− 0.391566521

1.73E−18

GSTM1

0.156396431

0.253910031

0.699109797

2.76E−09

4.08E−07

− 0.563212162

2.84E−40

PLAU

0.62150196

0.702145935

0.176011973

4.00E−09

5.92E−07

− 0.570934425

1.41E−41

PIGR

0.667952501

0.708575582

0.085176236

5.52E−09

8.16E−07

− 0.658618149

3.68E−59

CFTR

0.282943087

0.394972666

0.481240926

9.95E−09

1.47E−06

− 0.42150843

1.88E−21

SPDYC

0.704147468

0.724837107

0.041779213

1.76E−08

2.60E−06

− 0.47588325

1.18E−27

ZNF418

0.242511045

0.347906619

0.520649675

2.19E−08

3.23E−06

− 0.60435923

1.23E−47

KLHDC9

0.218223326

0.21602453

− 0.014610182

2.63E−08

3.90E−06

− 0.324984031

6.72E−13

ZNF69

0.117564379

0.142619404

0.278719274

2.66E−08

3.94E−06

− 0.321104504

1.30E−12

FAM84A

0.212175332

0.283041565

0.415757

3.53E−08

5.23E−06

− 0.335916441

9.96E−14

PPP1R14D

0.554947827

0.482097369

− 0.203027589

6.64E−08

9.82E−06

− 0.560710402

7.40E−40

TCP11

0.624104627

0.659912943

0.080487807

7.18E−08

1.06E−05

− 0.651746879

1.43E−57

ZNF300

0.328409005

0.415250076

0.338486746

9.38E−08

1.39E−05

− 0.472110183

3.46E−27

MPV17L

0.092385716

0.163253978

0.821376431

1.86E−07

2.75E−05

− 0.441792534

1.23E−23

KRT20

0.790374237

0.804070021

0.02478522

2.92E−07

4.33E−05

− 0.571800235

1.00E−41

GKN2

0.599299248

0.671212935

0.163493955

4.56E−07

6.76E−05

− 0.340697654

4.22E−14

ZNF502

0.329208879

0.402697069

0.290691725

6.68E−07

9.88E−05

− 0.663271171

2.91E−60

C17orf98

0.545496557

0.602566194

0.143549644

1.03E−06

0.000151843

− 0.529865333

5.12E−35

ZNF880

0.140875018

0.238786926

0.76130805

1.04E−06

0.000154315

− 0.560715099

7.38E−40

ZNF701

0.240700225

0.290476188

0.271182411

1.55E−06

0.000229592

− 0.408643207

3.83E−20

NR0B1

0.283614274

0.392651776

0.469320279

1.59E−06

0.000235507

− 0.320709703

1.39E−12

ZNF43

0.067179039

0.115788942

0.78541442

1.79E−06

0.000265629

− 0.375124186

5.52E−17

HCAR1

0.43400231

0.376162376

− 0.206347167

1.93E−06

0.000285658

− 0.401199574

2.07E−19

IRX2

0.289887257

0.40281496

0.474625351

3.59E−06

0.000530859

− 0.539421825

1.83E−36

TMEM63A

0.188744901

0.177446694

− 0.089051973

4.10E−06

0.000607535

− 0.345096982

1.89E−14

ITPRIPL1

0.294502802

0.374069204

0.345023839

4.14E−06

0.000613146

− 0.44960488

1.61E−24

LYZ

0.699231698

0.733682794

0.069385864

4.77E−06

0.000705417

− 0.424840466

8.40E−22

IFNLR1

0.246226199

0.232227751

− 0.084443891

9.60E−06

0.001421224

− 0.420673159

2.29E−21

TUSC1

0.13659181

0.18296341

0.421684184

9.60E−06

0.001421229

− 0.395587597

7.19E−19

MAGEB2

0.842482835

0.77366049

− 0.122946694

1.08E−05

0.001598591

− 0.352008819

5.20E−15

BVES

0.191406638

0.252664551

0.400582407

1.12E−05

0.001655808

− 0.321449081

1.23E−12

LRRIQ4

0.704379076

0.645150221

− 0.126716926

1.21E−05

0.001791741

− 0.38912631

2.93E−18

RASSF10

0.120420032

0.181039038

0.588225416

5.00E−05

0.007400364

− 0.328252794

3.83E−13

PRICKLE4

0.605330662

0.686379771

0.181283603

8.15E−05

0.012068682

− 0.318883347

1.89E−12

SYCP2

0.665037997

0.675303689

0.022099668

0.000123074

0.018214969

− 0.655943521

1.55E−58

WBP2NL

0.524579367

0.489275744

− 0.1005133

0.000184004

0.027232614

− 0.343246032

2.65E−14

BST2

0.422881206

0.380549863

− 0.152166944

0.000187292

0.027719241

− 0.589617095

7.07E−45

PLSCR4

0.17571366

0.196664014

0.162506649

0.000241916

0.035803514

− 0.365149084

4.10E−16

GBP4

0.149941894

0.137445221

− 0.125546784

0.000249246

0.036888372

− 0.316476516

2.82E−12

RPL7A

0.801995847

0.754500966

− 0.088072019

0.000275207

0.040730644

− 0.319271372

1.77E−12

ARHGDIB

0.327607353

0.313354218

− 0.064173323

0.000282085

0.04174863

− 0.552243

1.77E−38

CYB5A

0.127300153

0.141309476

0.150624055

0.000302943

0.044835593

− 0.371106098

1.25E−16