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Table 3 The top 8 GO terms enriched by the 266 DNA methylation driven genes in prostate cancer

From: Identification of key DNA methylation-driven genes in prostate adenocarcinoma: an integrative analysis of TCGA methylation data

Category

Term

Count

p value

Genes

BP

GO:0055114 ~ oxidation–reduction process

25

2.13E−06

STEAP4, ME3, OXA1L, GLUD1, DUOX1, PAH, HPDL, ALDH3A1, ALDH1A3, GPX3, HAAO, FASN, GPX7, DHCR24, FAXDC2, MAOB, CRYZ, CDO1, RDH5, CYBA, CYP27A1, AKR1B1, TMLHE, AOX1, CYBRD1

CC

GO:0070062 ~ extracellular exosome

66

6.38E−06

STEAP4, RARRES2, RPS2, SYNGR2, CANT1, GSTM2, DES, APOD, GPX3, LTF, PI15, ZDHHC1, BST2, CFTR, EEF2, CD40, CD38, KRT17, KRT15, TMEM106A, CYBRD1, HSPB1, SERPINB1, NEU1, CSTA, MFAP4, WFDC2, GSTP1, ACP5, PAH, CD74, B3GNT8, KRT5, ITGB8, KRT7, ALDH1A3, ENTPD5, FASN, RPL3, HAAO, ANGPTL1, RPL7A, MARS, BHMT2, S100A16, LGALS3, KLK2, KLK3, HIST1H2BH, MAOB, KLK1, CRYZ, ANXA2, PROM1, ORM1, ACSM1, C1ORF116, PKP1, PHB2, RAB34, AKR1B1, CAPG, AOX1, ALDH2, SLC46A3, PON3

MF

GO:0009055 ~ electron carrier activity

7

0.001504105

ACOX2, CYBA, AOX1, AKR1B1, MAOB, ALDH2, HAAO

BP

GO:0000302 ~ response to reactive oxygen species

5

0.0019364

CYBA, APOD, GPX3, GPX7, GSTP1

MF

GO:0004030 ~ aldehyde dehydrogenase [NAD(P)+] activity

3

0.002720156

ALDH1A3, ALDH2, ALDH3A1

MF

GO:0004602 ~ glutathione peroxidase activity

4

0.002838234

GSTM2, GPX3, GPX7, GSTP1

BP

GO:0042178 ~ xenobiotic catabolic process

3

0.003748861

GSTM1, GSTM2, CRYZ

BP

GO:0060349 ~ bone morphogenesis

4

0.005820424

SP5, LTF, ACP5, RIPPLY2