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Table 1 Characteristics of datasets included in the integrated analysis

From: Integrated analysis of 34 microarray datasets reveals CBX3 as a diagnostic and prognostic biomarker in glioblastoma

Year

Source accession

First author

Country

Assay type

Platform

PMID

2006

GSE4058

Diehn M

USA

SHV

GPL182

15827123

2006

GSE2223

Bredel M

USA

SHFK

GPL1833

16204036

2006

GSE4290

Fine HA

USA

Affymetrix Human Genome U133 Plus 2.0 Array

GPL570

16616334

2006

GSE4271

Phillips HS

USA

Affymetrix Human Genome U133A Array; Affymetrix Human Genome U133B Array

GPL96; GPL97

16530701

2006

GSE4412

Nelson SF

USA

Affymetrix Human Genome U133A Array; Affymetrix Human Genome U133B Array

GPL96; GPL97

15374961

2007

GSE9885

Marucci G

Italy

Agilent-011521 Human 1A Microarray G4110A; Agilent-012097 Human 1A Microarray (V2) G4110B

GPL885; GPL887

18953566

2007

GSE1993

Petalidis L

United Kingdom

Affymetrix Human Genome U133A Array

GPL96

18445660

2008

GSE12657

Moran LB

United Kingdom

Affymetrix Human Genome U95 Version 2 Array

GPL8300

NA

2009

GSE13276

Saulnier N

Italy

Affymetrix Human Genome U133A Array

GPL96

23472076

2010

GSE19728

Liu Z

China

Affymetrix Human Genome U133 Plus 2.0 Array

GPL570

21836821

2010

GSE16011

Gravendeel LA

Netherlands

Affymetrix GeneChip Human Genome U133 Plus 2.0 Arra

GPL8542

19920198

2010

GSE24072

Garcia JL

Spain

Affymetrix Human Genome U133A Array

GPL96

NA

2011

GSE30563

Lee M

South Korea

Affymetrix Human Genome U133 Plus 2.0 Array

GPL570

NA

2011

GSE15824

Morin PJ

Switzerland

Affymetrix Human Genome U133 Plus 2.0 Array

GPL570

21406405

2011

GSE22866

Etcheverry A

France

Agilent-014850 Whole Human Genome Microarray 4x44K G4112F

GPL4133

21156036

2012

GSE38330

Engler JR

USA

Agilent-014850 Whole Human Genome Microarray 4x44K G4112F; Agilent-020087 human whole genome 4x44K

GPL4133

22937035

2013

GSE50161

Donson AM

USA

Affymetrix Human Genome U133 Plus 2.0 Array

GPL570

24078694

2013

GSE43289

Tabernero MD

Spain

Affymetrix Human Genome U133 Plus 2.0 Array

GPL570

20484145

2013

GSE45921

Lu Y

China

Affymetrix Human Genome U133 Plus 2.0 Array

GPL570

23869222

2013

GSE52009

Jiang T

China

Agilent-014850 Whole Human Genome Microarray 4x44K

GPL6480

NA

2014

GSE43911

Hackermüller J

Germany

Agilent-021412 nONCOchip_1.0 021253

GPL13648

24594072

2014

GSE54004

deGroot J

USA

Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip

GPL18281

NA

2015

GSE62802

Marc Remke

Canada

Affymetrix Human Genome U133 Plus 2.0 Array

GPL570

NA

2015

GSE68848

Fine H

USA

Affymetrix Human Genome U133 Plus 2.0 Array

GPL570

19208739

2015

GSE68015

Donson AM

USA

Affymetrix Human Genome U133 Plus 2.0 Array

GPL570

25990246

2015

GSE66354

Donson AM

USA

Affymetrix Human Genome U133 Plus 2.0 Array

GPL570

25968456

2015

GSE70231

Mervi Heiskanen

USA

Affymetrix Human Full Length HuGeneFL Array

GPL80

11559565

2015

GSE68928

Mervi Heiskanen

USA

Affymetrix Human Full Length HuGeneFL Array; Affymetrix Human 35 K SubA Array

GPL80; GPL98

11742071

2015

GSE74462

Fan X

China

Affymetrix Human Gene 1.0 ST Array [transcript (gene) version]

GPL6244

NA

2016

GSE43378

Ryuya yamanaka

Japan

Affymetrix Human Genome U133 Plus 2.0 Array

GPL570

23745793

2016

GSE82009

Mervi Heiskanen

USA

Affymetrix Human Genome U95 Version 2 Array

GPL8300

12670911

  1. GSE: gene expression omnibus; GPL: gene platform