Dataset | Platform | Normal | GI | GC | GC_adjacent |
---|---|---|---|---|---|
Training | |||||
 GSE54129 | Afftmetrix GPL570 | 21a | – | 111 | – |
 GSE54043 | Afftmetrix GPL570 | 5a | 5a | – | – |
 GSE42252 | Afftmetrix GPL570 | – | – | 5 | – |
 GSE38749 | Afftmetrix GPL570 | – | – | 15 | – |
 GSE51725 | Afftmetrix GPL570 | – | – | 8 | – |
 GSE79973 | Afftmetrix GPL570 | – | – | 10 | – |
 GSE57303 | Afftmetrix GPL570 | – | – | 70 | – |
 GSE13911 | Afftmetrix GPL570 | – | – | 38 | – |
 GSE27411 | Illumina GPL6255 | – | 18a | – | – |
 GSE28541 | Illumina GPL13376 | – | – | 40 | – |
 GSE29998 | Illumina GPL6947 | – | – | 50 | – |
Total |  | 26 | 23 | 347 | – |
Validation | |||||
 GSE5081 | Afftmetrix GPL570 | – | 32a | – | – |
 GSE52138 | Afftmetrix GPL96 | – | – | 13a | 7a |
 GSE14210 | Afftmetrix GPL571 | – | – | 145a | – |
 GSE106656 | Afftmetrix GPL6244 | – | 21a | – | – |
 GSE34619 | Afftmetrix GPL6244 | 10a | – | – | – |
 GSE29272 | Afftmetrix GPL96 | – | – | 134 | 134 |
 GSE34942 | Afftmetrix GPL570 | – | – | 56 | – |
 GSE22377 | Afftmetrix GPL570 | – | – | 43 | – |
 GSE19826 | Afftmetrix GPL570 | – | – | 12 | 12 |
 GSE35809 | Afftmetrix GPL570 | – | – | 70 | – |
 GSE51105 | Afftmetrix GPL570 | – | – | 94 | – |
 GSE15459 | Afftmetrix GPL570 | – | – | 200 | – |
 GSE62254 | Afftmetrix GPL570 | – | – | 300 | – |
 GSE13861 | Illumina GPL6884 | – | – | 65 | 19 |
 GSE38024 | Illumina GPL10558 | – | – | 48 | – |
 GSE26899 | Illumina GPL6947 | – | – | 96 | 12 |
 GSE26253 | Illumina GPL8432 | – | – | 432 | – |
 GSE84437 | Illumina GPL6947 | – | – | 433 | – |
 GSE26942 | Illumina GPL6947 | – | – | 202 | 12 |
 GSE60662 | Agilent GPL13497 | 4a | 12a | – | – |
 TCGA | RNA-seq | – | – | 375 | 32 |
Total | Â | 14 | 65 | 2718 | 228 |