|
Phylum
|
Family/species
|
Disease
|
References
|
|---|
|
Proteobacteria
|
Campylobacter concisus
|
CD/UC
|
[87]
|
|
Invasive Escherichia coli
|
CD
|
[86, 89]
|
|
Pseudomonas spp.
|
CD
|
[104]
|
|
Helicobacter spp.
|
CD
|
[146]
|
|
Desulfovibrio spp.
|
UC
|
[88]
|
|
Actinobacteria
|
Atopobium parvulum
|
CD
|
[107]
|
|
Collinsella spp.
|
UC
|
[119]
|
|
Mycobacterium avium spp.
|
CD
|
[106]
|
|
Pasteurellaceae
|
CD
|
[106]
|
|
Firmicutes
|
Clostridium difficile
|
CD/UC
|
[117]
|
|
Ruminococcus gnavus
|
CD/UC
|
[110]
|
|
Veillonellaceae
|
CD
|
[119, 120]
|
|
Streptococcus spp.
|
CD/UC
|
[119]
|
|
Fusobacteria
|
Fucobacterium spp.
|
CD
|
[108]
|
|
Ascomycota
|
Clavispora lusitaniae
|
CD
|
[118, 128]
|
|
Kluyveromyces marxianus
|
CD
|
[118]
|
|
Candida albicans
|
CD
|
[118, 129]
|
|
Saccharomyces cerevisiae
| |
[118]
|
|
Cyberlindnera jadinii
|
CD
|
[124]
|
|
Bacteriophage
|
Caudovirales
|
CD
|
[130, 131]
|
