Table 1 circRNA-associated-ceRNA networks predicted to be involved in HIV-1 replication
mRNAs | miRNAs | Seed match | circRNAs |
|---|---|---|---|
CCNK | miR-27b-3p | 8mer | chr7:26236021−26237352− |
8mer | chr6:31236599−31321721− | ||
CDKN1A | miR-542-3p | 8mer | chr13:45112671−45114072− |
8mer | chr13:42385361−42393522− | ||
8mer | chr14:68151732−68157138− | ||
8mer | chr15:43440953−43452992+ | ||
8mer | chr5:82832826−82838087+ | ||
8mer | chr6:31236599−31321721− | ||
CDKN1A | miR-101-3p | 8mer | chr6:32487147−32548633− |
8mer | chr1:38052912−38054683− | ||
CDKN1A | let-7c-5p | 8mer | chr13:45112671−45114072− |
8mer | chr20:45891032−45912392− | ||
8mer | chr12:69210592−69218431+ | ||
8mer | chr16:354304−364683− | ||
IL15 | miR-548ah-3p | 8mer | chr16:19656208−19663412+ |
8mer | chr8:48866180−48869991− | ||
8mer | chr15:94910834−94928754+ | ||
8mer | chr15:55516087−55527154− |