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Table 2 Mutations identified in this study

From: Distinct mutations with different inheritance mode caused similar retinal dystrophies in one family: a demonstration of the importance of genetic annotations in complicated pedigrees

Gene

Variation

Status

Bioinformatics analysis

Reported or Novel

Population prevalence (allele count)

Nucleotide

Amino acid

SIFT

PolyPhen

PROVEN

rs no.

gnomAD

EXAC

C8ORF37

c.555G>A

p.W185*

Hom

NA

NA

NA

Novel

rs748014296

2/246148

1/121412

OFD1

c.358A>G

p.T120A

Hem

0.63 (tolerated)

0.006 (benign)

− 0.616 (netural)

Novel

rs755625951

4/178544

1/121388

TULP1

c.1255C>T

p.R419W

Hom

0 (damaging)

1 (probably damaging)

− 7.976 (deleterious)

Novel

rs775334320

12/217192

6/121222

RP1

c.2285_2289delTAAAT

p.L762Yfs*17

Het

NA

NA

NA

Novel

NA

NA

NA

  1. Hom homozygous, Hem hemizygous, Het heterozygous, NA not available
  2. SIFT: http://sift.bii.a-star.edu.sg/; PolyPhen: http://genetics.bwh.harvard.edu/pph2/; PROVEN: http://provean.jcvi.org/index.php; gnomAD: http://gnomad.broadinstitute.org/; EXAC: http://exac.broadinstitute.org/