Fig. 4

Chromosome conformations in MTX responders map to RA eQTLs. Bedtools shot of CCS markers mapped within 200 bp of previously identified RA eQTLs. The overlapping CCS:eQTLs are highlighted in yellow. a The CCS regions associated with the IFNAR1 locus on chromosome 21 map to 6 eQTLs. b The CCS regions associated with the IL-21R locus on chromosome 16 map to 21 eQTLs. c The CCS regions associated with the IL-23 locus on chromosome 12 map to 4 eQTLs. d The CCS regions associated with the IL-17A locus on chromosome 6 do not map to any eQTLs. e The CCS regions associated with the CXCL13 locus on chromosome 4 do not map to any eQTLs